RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 RAP2CQ9Y3L5 183 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 TRAF6Q9Y4K3 522 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 A0A1B0GTL3 188 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 UBDO15205 165 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 CLASP2O75122 1294 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 PRLP01236 227 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 S100BP04271 92 aaPredicted RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 HSPA1AP0DMV8 641 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 HSPA1BP0DMV9 641 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 CTSAP10619 480 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 PKMP14618 531 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 HOXC13P31276 330 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 SLC18A1P54219 525 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 NKX3-2P78367 333 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 ABRQ12979 859 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 KLF10Q13118 480 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 EIF4EBP2Q13542 120 aaPredicted RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
COPB2-201ENST00000333188 LRRC66Q68CR7 880 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 Q6ZVL8 140 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 GPSM1Q86YR5 675 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 ULK2Q8IYT8 1036 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 GALNT4Q8N4A0 578 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 ATP13A3Q9H7F0 1226 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 WWOXQ9NZC7 414 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 KIAA1522Q9P206 1035 aaPredicted RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 SLC25A13Q9UJS0 675 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 ZNF711Q9Y462 761 aa8.98□□□□□ -0.97
COPB2-201ENST00000333188 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
COPB2-201ENST00000333188 SERPINA6P08185 405 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ZDHHC11BP0C7U3 371 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 COX4I1P13073 169 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ITGALP20701 1170 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 STC1P52823 247 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 C1QTNF8P60827 252 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ST8SIA6P61647 398 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 NRG1Q02297 640 aaPredicted RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 CYLC2Q14093 348 aaPredicted RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 CAPRIN1Q14444 709 aaKnown RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 ACOX1Q15067 660 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 TCEAL8Q8IYN2 117 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ZNF398Q8TD17 642 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 GDPD5Q8WTR4 605 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 N4BP2L2Q92802 583 aaPredicted RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 CMTM5Q96DZ9 223 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 LRMDAQ9H2I8 198 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 IL21Q9HBE4 155 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 IL23AQ9NPF7 189 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 INTS6Q9UL03 887 aaKnown RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 IGLV3-10A0A075B6K4 115 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 SNNO75324 88 aaPredicted RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 SBK3P0C264 359 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 HGFP14210 728 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 EFNA1P20827 205 aaPredicted RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 PIK3R1P27986 724 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 MRPS22P82650 360 aaKnown RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 MESP2Q0VG99 397 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 NAB1Q13506 487 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 MPPE1Q53F39 396 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ICE2Q659A1 982 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 FAM45BPQ6NSW5 357 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 AFTPHQ6ULP2 937 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 BEND5Q7L4P6 421 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 ISCA2Q86U28 154 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 SFTPA1Q8IWL2 248 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 PPFIBP2Q8ND30 876 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 RIN3Q8TB24 985 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 METTL6Q8TCB7 284 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 FAM45AQ8TCE6 357 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 DCUN1D1Q96GG9 259 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 MFSD1Q9H3U5 465 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 NSUN3Q9H649 340 aaKnown RBP8.97□□□□□ -0.97
COPB2-201ENST00000333188 IGSF5Q9NSI5 407 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 AURKCQ9UQB9 309 aa8.97□□□□□ -0.97
COPB2-201ENST00000333188 CCDC189A1A4V9 331 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 NPIPB15A6NHN6 443 aaPredicted RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 H3BNC9 293 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 ECI2O75521 394 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 MT-ND1P03886 318 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 PTPN2P17706 415 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 ITPKAP23677 461 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 CA5AP35218 305 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 SNRPD1P62314 119 aaKnown RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 INSCQ1MX18 579 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 VPS26BQ4G0F5 336 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 FNDC3BQ53EP0 1204 aaKnown RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 SETD3Q86TU7 594 aaPredicted RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 TMPRSS6Q8IU80 811 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 VPS33AQ96AX1 596 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 VWCEQ96DN2 955 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 RAD9AQ99638 391 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 MGME1Q9BQP7 344 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 SEMA6AQ9H2E6 1030 aa8.96□□□□□ -0.97
COPB2-201ENST00000333188 EML4Q9HC35 981 aaKnown RBP8.96□□□□□ -0.97
COPB2-201ENST00000333188 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms