RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CDKN1CP49918 316 aaPredicted RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 DPTQ07507 201 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 AGERQ15109 404 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 DBN1Q16643 649 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ATP13A5Q4VNC0 1218 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF789Q5FWF6 425 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 MROH9Q5TGP6 573 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 NEK5Q6P3R8 708 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 CNSTQ6PJW8 725 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TRABD2AQ86V40 505 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 SERPINA9Q86WD7 417 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 LPGAT1Q92604 370 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 SCAMP4Q969E2 229 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 AP2M1Q96CW1 435 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 HHIPQ96QV1 700 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TTC1Q99614 292 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 GPR22Q99680 433 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 SPATA16Q9BXB7 569 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ITM2CQ9NQX7 267 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 SENP1Q9P0U3 644 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 CRLS1Q9UJA2 301 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 NOVA2Q9UNW9 492 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 MTO1Q9Y2Z2 717 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TRIOO75962 3097 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 GOLGA8CPA6NN73 597 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 NDUFS3O75489 264 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TM7SF2O76062 418 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 APBB3O95704 486 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ACRV1P26436 265 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 RPS21P63220 83 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 KCTD16Q68DU8 428 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ANO7Q6IWH7 933 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 NLRP8Q86W28 1048 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 PNPLA1Q8N8W4 532 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ISL2Q96A47 359 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ATXN7L3BQ96GX2 97 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 VPS35Q96QK1 796 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 SGK2Q9HBY8 427 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ZFR2Q9UPR6 939 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 ACTL7BQ9Y614 415 aa10.18□□□□□ -0.78
VIPAS39-201ENST00000327028 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 IGLON5A6NGN9 336 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 DCXO43602 365 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 RNGTTO60942 597 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UGT1A6P19224 532 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UGT1A1P22309 533 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UGT1A4P22310 534 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 CA5AP35218 305 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UGT1A3P35503 534 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UGT1A5P35504 534 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 PTGER3P43115 390 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 POLD2P49005 469 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 SERPINB8P50452 374 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 MTAPQ13126 283 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 ITIH4Q14624 930 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 SEL1L3Q68CR1 1132 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM124AQ86V42 546 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 HORMAD1Q86X24 394 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 DCLK2Q8N568 766 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 UHRF1Q96T88 793 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 EBF1Q9UH73 591 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 BDP1A6H8Y1 2624 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 NCOR1O75376 2440 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM95CA0A1B0GW59 222 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 FADS2P1A8MWK0 482 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 MT-ND3P03897 115 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 MAGEA12P43365 314 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 ADARP55265 1226 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 MAGOHP61326 146 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 MAP7D1Q3KQU3 841 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 SETMARQ53H47 684 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 SRRM1Q8IYB3 904 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 RBFAQ8N0V3 343 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 BTBD1Q9H0C5 482 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 ZDHHC3Q9NYG2 299 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 NUMA1Q14980 2115 aa10.17□□□□□ -0.78
VIPAS39-201ENST00000327028 IGLV3-16A0A075B6K0 115 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 A0A1W2PPM1 405 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 A0A1W2PQU0 124 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 UBA6A0AVT1 1052 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 LRRC72A6NJI9 287 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 FOXO6A8MYZ6 492 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TPP1O14773 563 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 RFPL1O75677 317 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 SOD1P00441 154 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ALDOAP04075 364 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PYGLP06737 847 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 OXTRP30559 389 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 CCNFP41002 786 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 RBM20Q5T481 1227 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms