RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RBL1P28749 1068 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 DCST2Q5T1A1 773 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 KBTBD6Q86V97 674 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 RXFP2Q8WXD0 754 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 A0A096LPK6 155 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 VAMP1P23763 118 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ANTXR2P58335 489 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SCGB2A2Q13296 93 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 BLMHQ13867 455 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PARP6Q2NL67 630 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MILR1Q7Z6M3 343 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ATCAYQ86WG3 371 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SPARTQ8N0X7 666 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 C3orf58Q8NDZ4 430 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 OR2W6PQ8NHA6 318 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SHCBP1LQ9BZQ2 653 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MRTO4Q9UKD2 239 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 FLVCR2Q9UPI3 526 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 POLR1DQ9Y2S0 133 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CLCN5P51795 746 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 TKTL1P51854 596 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CAPZA1P52907 286 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 LAMTOR4Q0VGL1 99 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 LSM12Q3MHD2 195 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 FUT11Q495W5 492 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 GLT6D1Q7Z4J2 308 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SLC47A2Q86VL8 602 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF419Q96HQ0 510 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MID1IP1Q9NPA3 183 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SERPINA6P08185 405 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 UBA1P22314 1058 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 RPL6Q02878 288 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF844Q08AG5 666 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 GRB10Q13322 594 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF517Q6ZMY9 492 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 AGMOQ6ZNB7 445 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 USP43Q70EL4 1123 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 METTL25Q8N6Q8 603 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 OR10R2Q8NGX6 335 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 C9orf43Q8TAL5 461 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF670Q9BS34 389 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PBDC1Q9BVG4 233 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 KCNN2Q9H2S1 579 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 DNTTP04053 509 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SRCP12931 536 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CREB5Q02930 508 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PON2Q15165 354 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 HM13Q8TCT9 377 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 OR2M4Q96R27 311 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NT5MQ9NPB1 228 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PARP4Q9UKK3 1724 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 A0A1W2PQ67 120 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NFKB1P19838 968 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MMP13P45452 471 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 DGCR6Q14129 220 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CSHL1Q14406 222 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ACOT1Q86TX2 421 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 LEMD2Q8NC56 503 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 HSPA12BQ96MM6 686 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF607Q96SK3 696 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 FTHL17Q9BXU8 183 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 FAM208AQ9UK61 1670 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 A0A0A0MRY4 1105 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SLC33A1O00400 549 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 WDPCPO95876 746 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CATP04040 527 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PGRP06401 933 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 KCNA5P22460 613 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 S100A3P33764 101 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 PRKCIP41743 596 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CBWD3Q5JTY5 395 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CBWD5Q5RIA9 395 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SPPL2AQ8TCT8 520 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 TCP10LQ8TDR4 215 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SPATA13Q96N96 652 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NFKBIZQ9BYH8 718 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 TMEM134Q9H6X4 195 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 RBM22Q9NW64 420 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 BAZ2AQ9UIF9 1905 aaKnown RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 M0R233 179 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CXCL11O14625 94 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CD6P30203 668 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CHRNA5P30532 468 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MEA1Q16626 185 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 SETMARQ53H47 684 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 NKAPLQ5M9Q1 402 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 C11orf96Q7Z7L8 435 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 LRRC71Q8N4P6 559 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 BEND7Q8N7W2 519 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 MED8Q96G25 268 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 ZDHHC12Q96GR4 267 aa9.69□□□□□ -0.86
COL12A1-201ENST00000322507 KCTD15Q96SI1 283 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-201ENST00000322507 CHD5Q8TDI0 1954 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms