RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZNF276Q8N554 614 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 PRICKLE1Q96MT3 831 aaPredicted RBP15.2■□□□□ 0.02
VARS2-201ENST00000321897 EXD2Q9NVH0 621 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 GIN1Q9NXP7 522 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 SIRPGQ9P1W8 387 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 CNTN6Q9UQ52 1028 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 LRRC14BA6NHZ5 514 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 H0Y858 1186 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 H3BNX3 289 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 ITGB1P05556 798 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 PRKCHP24723 683 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 HOXD10P28358 340 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 GATMP50440 423 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 OLIG1Q8TAK6 271 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 LINGO1Q96FE5 620 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 KCNA7Q96RP8 456 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 MIR1-1HGQ9H1L0 117 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 ITM2CQ9NQX7 267 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 ADAMTS5Q9UNA0 930 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 SQORQ9Y6N5 450 aa15.2■□□□□ 0.02
VARS2-201ENST00000321897 A0A0J9YYE9 177 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 FAM20BO75063 409 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 FGF3P11487 239 aaPredicted RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 FCGR1AP12314 374 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 POU1F1P28069 291 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 CEACAM7Q14002 265 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ZNF792Q3KQV3 632 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 MON1AQ86VX9 555 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 HORMAD1Q86X24 394 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 SLC7A5P1Q8MH63 180 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 FAR2Q96K12 515 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 TCAF1Q9Y4C2 921 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 CYBBP04839 570 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 SLC5A2P31639 672 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 CDK9P50750 372 aaKnown RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 NKX2-5P52952 324 aaPredicted RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 IL2P60568 153 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 RPL38P63173 70 aaKnown RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 FAM98BQ52LJ0 330 aaKnown RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 MBLAC2Q68D91 279 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 OR4L1Q8NH43 312 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 MAPK15Q8TD08 544 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 SCLYQ96I15 445 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 CCSER2Q9H7U1 834 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ACTL7AQ9Y615 435 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 CNMDO75829 334 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 CAPN1P07384 714 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 CDH2P19022 906 aaPredicted RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 MC4RP32245 332 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 SOAT1P35610 550 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ANKDD1AQ495B1 522 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 GCNT7Q6ZNI0 430 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ZNF280BQ86YH2 543 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 DBF4BQ8NFT6 615 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 DMRTB1Q96MA1 342 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ADGRE3Q9BY15 652 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 ELOVL6Q9H5J4 265 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 PCDHGB4Q9UN71 923 aa15.19■□□□□ 0.02
VARS2-201ENST00000321897 AHDC1Q5TGY3 1603 aaPredicted RBP15.19■□□□□ 0.02
VARS2-201ENST00000321897 E7ESA3 106 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 AZIN1O14977 448 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TOMM70O94826 608 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 LBPP18428 481 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 CDKL1Q00532 357 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TRIM32Q13049 653 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 MSLNQ13421 630 aaPredicted RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 PDCD4Q53EL6 469 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 OR2T34Q8NGX1 318 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 OR2T3Q8NH03 318 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ISOC1Q96CN7 298 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 SLC45A3Q96JT2 553 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 YIPF2Q9BWQ6 316 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ALG2Q9H553 416 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ANKRD6Q9Y2G4 727 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 GIT1Q9Y2X7 761 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 GOT2P00505 430 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 GRIA2P42262 883 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 RXRGP48443 463 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 PRKCZQ05513 592 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 SIM2Q14190 667 aaPredicted RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 STARD3Q14849 445 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 CMPK2Q5EBM0 449 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 TNFAIP8L3Q5GJ75 292 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 UGT2A3Q6UWM9 527 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 GALNT5Q7Z7M9 940 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 ZC3HC1Q86WB0 502 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 CENPLQ8N0S6 344 aaPredicted RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 OR10Q1Q8NGQ4 319 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 STAG3L4Q8TBR4 150 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 AUTS2Q8WXX7 1259 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 DPY30Q9C005 99 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 CACNA2D2Q9NY47 1150 aa15.18■□□□□ 0.02
VARS2-201ENST00000321897 CNOT6Q9ULM6 557 aaKnown RBP15.18■□□□□ 0.02
VARS2-201ENST00000321897 WDR37Q9Y2I8 494 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms