RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 MAP7Q14244 749 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 PARP15Q460N3 678 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 ERMARDQ5T6L9 678 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 SP5Q6BEB4 398 aaPredicted RBP13.14□□□□□ -0.31
SYCN-201ENST00000318438 ALKBH5Q6P6C2 394 aaKnown RBP13.14□□□□□ -0.31
SYCN-201ENST00000318438 ARHGAP22Q7Z5H3 698 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 PSTKQ8IV42 348 aaKnown RBP13.14□□□□□ -0.31
SYCN-201ENST00000318438 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 NAGSQ8N159 534 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 GALNT6Q8NCL4 622 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 PEBP4Q96S96 227 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 DNAJC7Q99615 494 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
SYCN-201ENST00000318438 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 PCDH12Q9NPG4 1184 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 ST14Q9Y5Y6 855 aa13.14□□□□□ -0.31
SYCN-201ENST00000318438 A0A1B0GTL3 188 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 KDELR3O43731 214 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 PRPSAP2O60256 369 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 CREG1O75629 220 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 KELP23276 732 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 MIPP30301 263 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 PCK1P35558 622 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 CCL11P51671 97 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 ILF3Q12906 894 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYCN-201ENST00000318438 AGERQ15109 404 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 CYP4V2Q6ZWL3 525 aaPredicted RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 UMODL1-AS1Q8N2C9 162 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 PELI3Q8N2H9 469 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 RANBP9Q96S59 729 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 DHX35Q9H5Z1 703 aaKnown RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 NOL6Q9H6R4 1146 aaKnown RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 MLXIPLQ9NP71 852 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 PCDHGA9Q9Y5G4 932 aaKnown RBP13.13□□□□□ -0.31
SYCN-201ENST00000318438 MED13LQ71F56 2210 aa13.13□□□□□ -0.31
SYCN-201ENST00000318438 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 EEF2KO00418 725 aaKnown RBP13.12□□□□□ -0.31
SYCN-201ENST00000318438 INSIG1O15503 277 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 PIGNO95427 931 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 FUCA1P04066 466 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 CYP1A2P05177 515 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 TPM1P09493 284 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 GPLD1P80108 840 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
SYCN-201ENST00000318438 CA9Q16790 459 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
SYCN-201ENST00000318438 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 SLC6A19Q695T7 634 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 OR8K1Q8NGG5 319 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
SYCN-201ENST00000318438 SNRNP40Q96DI7 357 aaKnown RBP13.12□□□□□ -0.31
SYCN-201ENST00000318438 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 KLHL3Q9UH77 587 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 PHTF1Q9UMS5 762 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 MFHAS1Q9Y4C4 1052 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 SPG11Q96JI7 2443 aa13.12□□□□□ -0.31
SYCN-201ENST00000318438 ABCA2Q9BZC7 2435 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 SSU72P8A0A1W2PR75 194 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 RASA4BC9J798 803 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 RASA4O43374 803 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 BUB1O43683 1085 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 MFAP3LO75121 409 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 RECQL5O94762 991 aaPredicted RBP13.11□□□□□ -0.31
SYCN-201ENST00000318438 TMCC1O94876 653 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 NFKBIAP25963 317 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 MMP12P39900 470 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 GNPDA1P46926 289 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 NDST2P52849 883 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 RAD51Q06609 339 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
SYCN-201ENST00000318438 PAPD7Q5XG87 772 aaKnown RBP13.11□□□□□ -0.31
SYCN-201ENST00000318438 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 RFX8Q6ZV50 586 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 CASKIN2Q8WXE0 1202 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 STAMBPL1Q96FJ0 436 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 LURAP1Q96LR2 239 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
SYCN-201ENST00000318438 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 WDR26Q9H7D7 661 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 ASF1BQ9NVP2 202 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
SYCN-201ENST00000318438 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
SYCN-201ENST00000318438 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms