RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PPM1MQ96MI6 270 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 HBEGFQ99075 208 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 ALOXE3Q9BYJ1 711 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 SPC25Q9HBM1 224 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 SEMA4BQ9NPR2 832 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-202ENST00000318266 ITM2CQ9NQX7 267 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 CACNG4Q9UBN1 327 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 OR12D3Q9UGF7 316 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 VWA7Q9Y334 891 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 SNX5Q9Y5X3 404 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
PTPRA-202ENST00000318266 COL11A1P12107 1806 aaPredicted RBP9.62□□□□□ -0.87
PTPRA-202ENST00000318266 TCRBV5S2A0A599 114 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 UBXN8O00124 270 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 GAS2O43903 313 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 LRIG2O94898 1065 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CDK14O94921 469 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 BMP4P12644 408 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ARL1P40616 181 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 OAZ1P54368 228 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CDKN2DP55273 166 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 MTPNP58546 118 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ADAM17P78536 824 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TSPY1Q01534 308 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 IL1RL1Q01638 556 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 POU4F1Q01851 419 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ZNF678Q5SXM1 525 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TMEM207Q6UWW9 146 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CATSPERGQ6ZRH7 1159 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 FRA10AC1Q70Z53 315 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TTC39CQ8N584 583 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 FBXO30Q8TB52 745 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ULBP1Q9BZM6 244 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TUBB1Q9H4B7 451 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PRDM8Q9NQV8 689 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PDGFCQ9NRA1 345 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PDE10AQ9Y233 779 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PCDHA9Q9Y5H5 950 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CSADQ9Y600 493 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 OAS3Q9Y6K5 1087 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 U3KQV3 271 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NCF1BA6NI72 391 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NCF1CA8MVU1 366 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 AP3B1O00203 1094 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CNTN5O94779 1100 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 DDNO94850 711 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NCF1P14598 390 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ACADSBP45954 432 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 KCNK10P57789 538 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 UFM1P61960 85 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CTU2Q2VPK5 515 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NOL9Q5SY16 702 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 HECTD2Q5U5R9 776 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 GLYATQ6IB77 296 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TAF2Q6P1X5 1199 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 LINC00523Q86TU6 105 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CLYBLQ8N0X4 340 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 FAM86B1Q8N7N1 296 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PDPRQ8NCN5 879 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PNPT1Q8TCS8 783 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 AFG1LQ8WV93 481 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 OSCP1Q8WVF1 389 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 FKBP10Q96AY3 582 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PTERQ96BW5 349 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 CCDC126Q96EE4 140 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TKTL2Q9H0I9 626 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 POLG2Q9UHN1 485 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 UTS2RQ9UKP6 389 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 INVSQ9Y283 1065 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 SYCE1LA8MT33 242 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 MSI1O43347 362 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TSPAN1O60635 241 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 DAB1O75553 588 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 C22orf31O95567 290 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 RBP1P09455 135 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 IMPDH1P20839 514 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 HRH2P25021 359 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 MTHFRP42898 656 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 DAG1Q14118 895 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 PRMT9Q6P2P2 845 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 RBM23Q86U06 439 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NIM1KQ8IY84 436 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 C2CD4AQ8NCU7 369 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-202ENST00000318266 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■■■ 31.4
PTPRA-202ENST00000318266 ESAMQ96AP7 390 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 NSMCE2Q96MF7 247 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 HPS4Q9NQG7 708 aa9.61□□□□□ -0.87
PTPRA-202ENST00000318266 ASPDHA6ND91 283 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 GNGT2O14610 69 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 AZIN1O14977 448 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 C1RP00736 705 aa9.6□□□□□ -0.87
PTPRA-202ENST00000318266 ZNF286BP0CG31 522 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms