RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CLCQ05315 142 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 ANKRD26P1Q6NSI1 321 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 SCD5Q86SK9 330 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 RYBPQ8N488 228 aaPredicted RBP19.01■□□□□ 0.63
RTN4-201ENST00000317610 OR13F1Q8NGS4 319 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 DNAJB14Q8TBM8 379 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 MAGEE2Q8TD90 523 aaPredicted RBP19.01■□□□□ 0.63
RTN4-201ENST00000317610 TBATAQ96M53 351 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 PAAF1Q9BRP4 392 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 NAA50Q9GZZ1 169 aaKnown RBP19.01■□□□□ 0.63
RTN4-201ENST00000317610 FAM105AQ9NUU6 356 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 CLEC11AQ9Y240 323 aa19.01■□□□□ 0.63
RTN4-201ENST00000317610 A0A1B0GTL3 188 aa19■□□□□ 0.63
RTN4-201ENST00000317610 CYBBP04839 570 aa19■□□□□ 0.63
RTN4-201ENST00000317610 MAGEA8P43361 318 aa19■□□□□ 0.63
RTN4-201ENST00000317610 ITKQ08881 620 aa19■□□□□ 0.63
RTN4-201ENST00000317610 MOGQ16653 247 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PAGE3Q5JUK9 113 aa19■□□□□ 0.63
RTN4-201ENST00000317610 ZNF773Q6PK81 442 aa19■□□□□ 0.63
RTN4-201ENST00000317610 KIAA2013Q8IYS2 634 aa19■□□□□ 0.63
RTN4-201ENST00000317610 ZNF683Q8IZ20 524 aa19■□□□□ 0.63
RTN4-201ENST00000317610 ARRDC2Q8TBH0 407 aa19■□□□□ 0.63
RTN4-201ENST00000317610 BPIFB1Q8TDL5 484 aa19■□□□□ 0.63
RTN4-201ENST00000317610 HMCESQ96FZ2 354 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PLEKHA8Q96JA3 519 aa19■□□□□ 0.63
RTN4-201ENST00000317610 KLHL5Q96PQ7 755 aa19■□□□□ 0.63
RTN4-201ENST00000317610 BRINP2Q9C0B6 783 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PALMDQ9NP74 551 aa19■□□□□ 0.63
RTN4-201ENST00000317610 IFT80Q9P2H3 777 aaPredicted RBP19■□□□□ 0.63
RTN4-201ENST00000317610 IQCA1LA6NCM1 817 aa19■□□□□ 0.63
RTN4-201ENST00000317610 CASTOR2A6NHX0 329 aa19■□□□□ 0.63
RTN4-201ENST00000317610 H0Y858 1186 aa19■□□□□ 0.63
RTN4-201ENST00000317610 CD3EAPO15446 510 aaKnown RBP19■□□□□ 0.63
RTN4-201ENST00000317610 KERAO60938 352 aa19■□□□□ 0.63
RTN4-201ENST00000317610 GLP2RO95838 553 aa19■□□□□ 0.63
RTN4-201ENST00000317610 GOT2P00505 430 aaKnown RBP19■□□□□ 0.63
RTN4-201ENST00000317610 NCK1P16333 377 aa19■□□□□ 0.63
RTN4-201ENST00000317610 TMBIM6P55061 237 aa19■□□□□ 0.63
RTN4-201ENST00000317610 NAA20P61599 178 aa19■□□□□ 0.63
RTN4-201ENST00000317610 SPIDRQ14159 915 aa19■□□□□ 0.63
RTN4-201ENST00000317610 CBX2Q14781 532 aaPredicted RBP19■□□□□ 0.63
RTN4-201ENST00000317610 XKR7Q5GH72 579 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PIK3R6Q5UE93 754 aa19■□□□□ 0.63
RTN4-201ENST00000317610 ANKRD23Q86SG2 305 aa19■□□□□ 0.63
RTN4-201ENST00000317610 LRRTM3Q86VH5 581 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PROSER1Q86XN7 944 aa19■□□□□ 0.63
RTN4-201ENST00000317610 TMEM199Q8N511 208 aa19■□□□□ 0.63
RTN4-201ENST00000317610 PDPRQ8NCN5 879 aa19■□□□□ 0.63
RTN4-201ENST00000317610 NPLOC4Q8TAT6 608 aa19■□□□□ 0.63
RTN4-201ENST00000317610 KIAA1191Q96A73 305 aa19■□□□□ 0.63
RTN4-201ENST00000317610 TEX37Q96LM6 180 aa19■□□□□ 0.63
RTN4-201ENST00000317610 AARSD1Q9BTE6 412 aaKnown RBP19■□□□□ 0.63
RTN4-201ENST00000317610 NUSAP1Q9BXS6 441 aaKnown RBP19■□□□□ 0.63
RTN4-201ENST00000317610 AGO3Q9H9G7 860 aaKnown RBP19■□□□□ 0.63
RTN4-201ENST00000317610 PRDM5Q9NQX1 630 aaPredicted RBP19■□□□□ 0.63
RTN4-201ENST00000317610 TLR9Q9NR96 1032 aa19■□□□□ 0.63
RTN4-201ENST00000317610 LEF1Q9UJU2 399 aaPredicted RBP19■□□□□ 0.63
RTN4-201ENST00000317610 PDHXO00330 501 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 TNFRSF10BO14763 440 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 MOCS2O96007 188 aaPredicted RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 HRH2P25021 359 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 EEF1DP29692 281 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 C21orf59P57076 290 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 SEMA3AQ14563 771 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 MRNIPQ6NTE8 343 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 IFNEQ86WN2 208 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 RIMKLAQ8IXN7 391 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 ACDQ96AP0 544 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 VPS33AQ96AX1 596 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 BIRC7Q96CA5 298 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 SOX17Q9H6I2 414 aaPredicted RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 TMEM45AQ9NWC5 275 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 GMIPQ9P107 970 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 UXTQ9UBK9 157 aaPredicted RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 ARL5CA6NH57 179 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 RPS17P08708 135 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 HAPLN1P10915 354 aaPredicted RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 RHOQP17081 205 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 OGNP20774 298 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 POLR2IP36954 125 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 NFATC3Q12968 1075 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 PDCD4Q53EL6 469 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 TBPL2Q6SJ96 375 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 METTL23Q86XA0 190 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 ZBTB8BQ8NAP8 495 aaPredicted RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 OR10T2Q8NGX3 314 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 PABPC5Q96DU9 382 aaKnown RBP18.99■□□□□ 0.63
RTN4-201ENST00000317610 ZNF599Q96NL3 588 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 BDH2Q9BUT1 245 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 SLC45A1Q9Y2W3 748 aa18.99■□□□□ 0.63
RTN4-201ENST00000317610 GBF1Q92538 1859 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 C17orf102A2RUQ5 167 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 SEC14L2O76054 403 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 TFPTP0C1Z6 253 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 UGT1A1P22309 533 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 UGT1A4P22310 534 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 TPP2P29144 1249 aaPredicted RBP18.98■□□□□ 0.63
RTN4-201ENST00000317610 HOXC8P31273 242 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 UGT1A3P35503 534 aa18.98■□□□□ 0.63
RTN4-201ENST00000317610 UGT1A5P35504 534 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms