RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 A0A0U1RQF3 1178 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 LRRC14BA6NHZ5 514 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 DYNC1LI2O43237 492 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 PIGNO95427 931 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 PRAMEF12O95522 483 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 INHBAP08476 426 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TYMPP19971 482 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 YWHAQP27348 245 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TYK2P29597 1187 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 GSTM4Q03013 218 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 RING1Q06587 406 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 BFSP2Q13515 415 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SELPLGQ14242 412 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 KDM4DQ6B0I6 523 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SLC41A1Q8IVJ1 513 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 FAM86B1Q8N7N1 296 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 DTX3LQ8TDB6 740 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 DEPDC1BQ8WUY9 529 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 NDNQ99608 321 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SDHCQ99643 169 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TMEM79Q9BSE2 394 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 APOL6Q9BWW8 343 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 FBRSL1Q9HCM7 1045 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TCF7L2Q9NQB0 619 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 NLE1Q9NVX2 485 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SIRT5Q9NXA8 310 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 VNN3Q9NY84 501 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 XPR1Q9UBH6 696 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 GULP1Q9UBP9 304 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 MARCOQ9UEW3 520 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 OR12D3Q9UGF7 316 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 NDOR1Q9UHB4 597 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 POLG2Q9UHN1 485 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TMCO1Q9UM00 188 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 FREM2Q5SZK8 3169 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 H3BMQ9 156 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 J3KR12 359 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 KCNK1O00180 336 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 USP12O75317 370 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 IPO13O94829 963 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 RB1P06400 928 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 ESRRAP11474 423 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 HMGA1P17096 107 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 RPL9P32969 192 aaKnown RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 WNT3P56703 355 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SLC12A1Q13621 1099 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TGFBIQ15582 683 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 SMU1Q2TAY7 513 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 HSP90AA5PQ58FG0 334 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TCHHL1Q5QJ38 904 aaPredicted RBP7.8□□□□□ -1.16
CNOT4-201ENST00000315544 TMEM199Q8N511 208 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 CMTM5Q96DZ9 223 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 COG8Q96MW5 612 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 PCDHAC1Q9H158 963 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 COQ10BQ9H8M1 238 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 DMTF1Q9Y222 760 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 HEY1Q9Y5J3 304 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 AP4B1Q9Y6B7 739 aa7.8□□□□□ -1.16
CNOT4-201ENST00000315544 H3BSA7 217 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TIMM44O43615 452 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 SUPT7LO94864 414 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 IFNB1P01574 187 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ATF6P18850 670 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 SHMT2P34897 504 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ISL1P61371 349 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TRAF3Q13114 568 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MTAPQ13126 283 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MAPK11Q15759 364 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MTX3Q5HYI7 312 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 C6orf52Q5T4I8 152 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ERI1Q8IV48 349 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CD200R1Q8TD46 325 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 NUDT8Q8WV74 236 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ACDQ96AP0 544 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 NSUN5Q96P11 429 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 OSMRQ99650 979 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 HERC2P3Q9BVR0 1158 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 DERL2Q9GZP9 239 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CCDC195A0A1B0GUA6 201 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 LINC01553A4QN01 128 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 AQP12BA6NM10 295 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TRIM38O00635 465 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PRAMEF11O60813 436 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 H6PDO95479 791 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 APOA4P06727 396 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MATN1P21941 496 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 RPL5P46777 297 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TMPRSS15P98073 1019 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 KDSRQ06136 332 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MPP3Q13368 585 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 IRF3Q14653 427 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MDH1BQ5I0G3 518 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ANKRD26P1Q6NSI1 321 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PIWIL4Q7Z3Z4 852 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 AQP12AQ8IXF9 295 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms