RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 MFSD1Q9H3U5 465 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 BRD9Q9H8M2 597 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TNRC6CQ9HCJ0 1690 aaKnown RBP6.16□□□□□ -1.42
PRKDC-201ENST00000314191 IQCF5A8MTL0 148 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 NPHS1O60500 1241 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 MTX2O75431 263 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 OAZ2O95190 189 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ITGAXP20702 1163 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 SLC20A2Q08357 652 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PLEKHG4Q58EX7 1191 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF789Q5FWF6 425 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 PM20D1Q6GTS8 502 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 LYSMD3Q7Z3D4 306 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 RD3Q7Z3Z2 195 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 VPS33AQ96AX1 596 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 TCF25Q9BQ70 676 aa6.16□□□□□ -1.42
PRKDC-201ENST00000314191 STX16-NPEPL1H3BU86 382 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CDH2P19022 906 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ZBTB2Q8N680 514 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ITFG1Q8TB96 612 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ARNTL2Q8WYA1 636 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 TMEM175Q9BSA9 504 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 COMMD8Q9NX08 183 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 LNPEPQ9UIQ6 1025 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF711Q9Y462 761 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 C15orf38-AP3S2A0A0A6YYH1 394 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CDK14O94921 469 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 S1PR4O95977 384 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 DYNC1I2Q13409 638 aaKnown RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 XKR6Q5GH73 641 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ARPINQ7Z6K5 226 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 TMEM135Q86UB9 458 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CEP97Q8IW35 865 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 A0A1W2PQ67 120 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ILVBLA1L0T0 632 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 FAM149AA5PLN7 773 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SLC9A3R1O14745 358 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 FYNP06241 537 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SPAM1P38567 509 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 POLD2P49005 469 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 LCP2Q13094 533 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ALKAL1Q6UXT8 129 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF621Q6ZSS3 439 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 C2orf73Q8N5S3 287 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF366Q8N895 744 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PYCR2Q96C36 320 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 THG1LQ9NWX6 298 aaKnown RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PCDHB1Q9Y5F3 818 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 COPG1Q9Y678 874 aaKnown RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 IFRD1O00458 451 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 GABBR2O75899 941 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CAPN1P07384 714 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PAX7P23759 505 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 RALGPS2Q86X27 583 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 DLG3Q92796 817 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SLC7A6OSQ96CW6 309 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 MRGPRX2Q96LB1 330 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 TCF12Q99081 682 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF490Q9ULM2 529 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PRPF19Q9UMS4 504 aaKnown RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 POMPQ9Y244 141 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 COX7A2P14406 83 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 OGNP20774 298 aaKnown RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PDK3Q15120 406 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 TPGS2Q68CL5 300 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CCDC81Q6ZN84 652 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CXorf40AQ8TE69 158 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ANKRD27Q96NW4 1050 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CARNS1A5YM72 827 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SLC28A1O00337 649 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 KDELR3O43731 214 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 TIPRLO75663 272 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PTGER3P43115 390 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 GPR1P46091 355 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 REP15Q6BDI9 236 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SERPINA13PQ6UXR4 307 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 PHACTR4Q8IZ21 702 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 DHRSXQ8N5I4 330 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CLDN19Q8N6F1 224 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-201ENST00000314191 SH3GL1Q99961 368 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CAPN10Q9HC96 672 aa6.15□□□□□ -1.42
PRKDC-201ENST00000314191 CHI3L1P36222 383 aaPredicted RBP6.15□□□□□ -1.43
PRKDC-201ENST00000314191 TCEA2Q15560 299 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 IL23RQ5VWK5 629 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 RAET1GQ6H3X3 334 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 TNIP2Q8NFZ5 429 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 CDK15Q96Q40 435 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 TBC1D30Q9Y2I9 924 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 RGPD5Q99666 1765 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 PRAMEF11O60813 436 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 IDO1P14902 403 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 IMP4Q96G21 291 aaKnown RBP6.15□□□□□ -1.43
PRKDC-201ENST00000314191 FAM83DQ9H4H8 585 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 ZNF556Q9HAH1 456 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 MIEF1Q9NQG6 463 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 STRCP1A6NGW2 1772 aa6.15□□□□□ -1.43
PRKDC-201ENST00000314191 POU1F1P28069 291 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms