RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TXNDC11Q6PKC3 985 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 TMEM26Q6ZUK4 368 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 MOB2Q70IA6 237 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 AADATQ8N5Z0 425 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 OR13F1Q8NGS4 319 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 RAB2BQ8WUD1 216 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 KIAA1191Q96A73 305 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 RDH12Q96NR8 316 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 ATOH8Q96SQ7 321 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 MUC3BQ9H195 1237 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 NDFIP2Q9NV92 336 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 IFT80Q9P2H3 777 aaPredicted RBP13.78□□□□□ -0.2
MKS1-201ENST00000313863 PAIP2BQ9ULR5 123 aaKnown RBP13.78□□□□□ -0.2
MKS1-201ENST00000313863 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 B3GNT3Q9Y2A9 372 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 CRYL1Q9Y2S2 319 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
MKS1-201ENST00000313863 A0A1W2PPW3 197 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 HAS3O00219 553 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 SNX2O60749 519 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 SOAT2O75908 522 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 MLYCDO95822 493 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 FGF1P05230 155 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 PRR35P0CG20 571 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 ARSDP51689 593 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 TSPY1Q01534 308 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 FXNQ16595 210 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 TAF2Q6P1X5 1199 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 IFNEQ86WN2 208 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 OFCC1Q8IZS5 231 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 THEM5Q8N1Q8 247 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 GAD1Q99259 594 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 LRRC3Q9BY71 257 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 BRINP2Q9C0B6 783 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 DERL2Q9GZP9 239 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 ING2Q9H160 280 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 AGO3Q9H9G7 860 aaKnown RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 FAM105AQ9NUU6 356 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 MARCH4Q9P2E8 410 aaPredicted RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
MKS1-201ENST00000313863 OAS3Q9Y6K5 1087 aaKnown RBP13.77□□□□□ -0.21
MKS1-201ENST00000313863 LOC285095A0A1B0GVY8 99 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 FAM234BA2RU67 622 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 IFRD1O00458 451 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 STX16O14662 325 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 LDB2O43679 373 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 GMNNO75496 209 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 BCL10O95999 233 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 MOCS2O96007 188 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 HPRP00739 348 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 INHBBP09529 407 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 OCM2P0CE71 109 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 UROSP10746 265 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 MTHFD2P13995 350 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 UGT1A1P22309 533 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 UGT1A4P22310 534 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 UGT1A3P35503 534 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 UGT1A5P35504 534 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 POLR2JP52435 117 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 PHEXP78562 749 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 RAD51Q06609 339 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 CBX3Q13185 183 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 OR4D1Q15615 310 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 NEDD8Q15843 81 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 CRY1Q16526 586 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TIGD5Q53EQ6 642 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TRUB1Q8WWH5 349 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 CASP10Q92851 521 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 SDCCAG3Q96C92 435 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 BIRC7Q96CA5 298 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 RTP3Q9BQQ7 232 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 AARSD1Q9BTE6 412 aaKnown RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 ZYG11BQ9C0D3 744 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 TUBB1Q9H4B7 451 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 CATSPERZQ9NTU4 200 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
MKS1-201ENST00000313863 MPP6Q9NZW5 540 aa13.76□□□□□ -0.21
MKS1-201ENST00000313863 UXTQ9UBK9 157 aaPredicted RBP13.76□□□□□ -0.21
MKS1-201ENST00000313863 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms