RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 LAS2Q8IYD9 372 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 GALNT15Q8N3T1 639 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TMEM156Q8N614 296 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TXNDC15Q96J42 360 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 PIMREGQ9BSJ6 248 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NFKBIZQ9BYH8 718 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 AGPAT5Q9NUQ2 364 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ZNF358Q9NW07 568 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CPSF4LA6NMK7 179 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 DRGXA6NNA5 263 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SUPT20HL2P0C7V6 817 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 HNRNPLP14866 589 aaKnown RBP eCLIP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 IL4RP24394 825 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 GCH1P30793 250 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 HNF4AP41235 474 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SLC1A1P43005 524 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SCTRP47872 440 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 KCNJ6P48051 423 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NPY2RP49146 381 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NUMBP49757 651 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ACTA2P62736 377 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ACTG2P63267 376 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ACTC1P68032 377 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ACTA1P68133 377 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CSTF1Q05048 431 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SUPT20HL1Q3ZLR7 823 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 FRRS1Q6ZNA5 592 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 FTMTQ8N4E7 242 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 PNMA1Q8ND90 353 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NUDT10Q8NFP7 164 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NUDT11Q96G61 164 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ALG12Q9BV10 488 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ACTRT3Q9BYD9 372 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ALKBH4Q9NXW9 302 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 H3BVH4 76 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ZBTB7AO95365 584 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CCNE2O96020 404 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NR2F2P24468 414 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 GNPDA1P46926 289 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ST8SIA6P61647 398 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 REEP5Q00765 189 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SERINC3Q13530 473 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 QRICH1Q2TAL8 776 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 WSCD2Q2TBF2 565 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 RNASE10Q5GAN6 216 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 VWA1Q6PCB0 445 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SYDE1Q6ZW31 735 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ZDHHC13Q8IUH4 622 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ITFG1Q8TB96 612 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TNFRSF25Q93038 417 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SULT4A1Q9BR01 284 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TPPP3Q9BW30 176 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 REEP1Q9H902 201 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TGOLN2O43493 480 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SNRPB2P08579 225 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SNRPA1P09661 255 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 HALP42357 657 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NPBWR1P48145 328 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SLC1A6P48664 564 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 RAB39AQ14964 217 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NOL9Q5SY16 702 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 UBAP2Q5T6F2 1119 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 GPRC6AQ5T6X5 926 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 TCEANCQ8N8B7 351 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 ZNF565Q8N9K5 539 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 OTUD7AQ8TE49 926 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CASTOR1Q8WTX7 329 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NSMAFQ92636 917 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 KXD1Q9BQD3 176 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 NINJ2Q9NZG7 142 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 LUZP4Q9P127 313 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 CAMK2AQ9UQM7 478 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 MAB21L2Q9Y586 359 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 PTPRGP23470 1445 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SAMD9Q5K651 1589 aa7.61□□□□□ -1.19
LIMCH1-201ENST00000313860 SERPINA4P29622 427 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 PEX3P56589 373 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 TFCP2Q12800 502 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 CEBPEQ15744 281 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 FAXCQ5TGI0 409 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 MAMSTRQ6ZN01 415 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 GALNT12Q8IXK2 581 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 THEM5Q8N1Q8 247 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 NPRL2Q8WTW4 380 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 IMP4Q96G21 291 aaKnown RBP7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 ZNF184Q99676 751 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 CCDC106Q9BWC9 280 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 KCTD10Q9H3F6 313 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 DENND2DQ9H6A0 471 aaPredicted RBP7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 FAM49BQ9NUQ9 324 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 TMEM260Q9NX78 707 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 TAS2R1Q9NYW7 299 aa7.6□□□□□ -1.19
LIMCH1-201ENST00000313860 CXXC1Q9P0U4 656 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms