RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CSPG4P5Q96PW8 444 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PI4K2AQ9BTU6 479 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SIAEQ9HAT2 523 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SENP2Q9HC62 589 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ZNF221Q9UK13 617 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 FBXL21Q9UKT6 434 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 THRBP10828 461 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 KLF10Q13118 480 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 P2RY8Q86VZ1 359 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ARL10Q8N8L6 244 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 LNX1Q8TBB1 728 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 PYDC1Q8WXC3 89 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 POLR1BQ9H9Y6 1135 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 LRG1P02750 347 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 YBX3P16989 372 aaKnown RBP eCLIP8.79□□□□□ -1
COL6A5-202ENST00000312481 RHOAP61586 193 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PRR5P85299 388 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ARSHQ5FYA8 562 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TEX47Q8TBZ9 253 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 BRSK1Q8TDC3 778 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 C3orf14Q9HBI5 128 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 CHST7Q9NS84 486 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 MRPS33Q9Y291 106 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 TRPV2Q9Y5S1 764 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 RPP40O75818 363 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 URODP06132 367 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 HGFP14210 728 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 GJA8P48165 433 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TUBP50607 506 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 POU6F1Q14863 301 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 DACT2Q5SW24 774 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 KLHL35Q6PF15 583 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 YAF2Q8IY57 180 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 KAT5Q92993 513 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 MOAP1Q96BY2 351 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ERMAPQ96PL5 475 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 TRIM2Q9C040 744 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 NEUROD4Q9HD90 331 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 HEBP2Q9Y5Z4 205 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PSMD11O00231 422 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PTPN1P18031 435 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 HNF4AP41235 474 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 NRIP1P48552 1158 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 INCA1Q0VD86 236 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SP140Q13342 867 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ITPK1Q13572 414 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 IL27RAQ6UWB1 636 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 APTXQ7Z2E3 356 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 OR8J3Q8NGG0 315 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 OR4L1Q8NH43 312 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PLEKHO2Q8TD55 490 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 GIPC3Q8TF64 312 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 HDAC2Q92769 488 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 OSBPL7Q9BZF2 842 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 NT5MQ9NPB1 228 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ERVW-1Q9UQF0 538 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TEX264Q9Y6I9 313 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 TP53BP1Q12888 1972 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 PDCD5O14737 125 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ENTPD5O75356 428 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ARP10275 920 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GPC1P35052 558 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 RGS7P49802 495 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 POLR2JP52435 117 aaKnown RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 CDYL2Q8N8U2 506 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 KCNN1Q92952 543 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CHID1Q9BWS9 393 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 OXSMQ9NWU1 459 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 MARCH2Q9P0N8 246 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CARD8Q9Y2G2 431 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GRIP1Q9Y3R0 1128 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 STYXL1Q9Y6J8 313 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 ARID1AO14497 2285 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SEC22BO75396 215 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 MYCP01106 439 aaPredicted RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 HUNKP57058 714 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 BCL2L1Q07817 233 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 GPC2Q8N158 579 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SETD6Q8TBK2 473 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 USP29Q9HBJ7 922 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PLA2G4CQ9UP65 541 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SLC15A5A6NIM6 579 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
COL6A5-202ENST00000312481 GRIA1P42261 906 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CACNG1Q06432 222 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 PLD5Q8N7P1 536 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 CCDC107Q8WV48 283 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 C8orf48Q96LL4 319 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 KLHL42Q9P2K6 505 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 E5RJQ4 531 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 AKR1A1P14550 325 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 BMP7P18075 431 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 RHDQ02161 417 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 IL10RBQ08334 325 aa8.78□□□□□ -1
COL6A5-202ENST00000312481 SYT16Q17RD7 645 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms