RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 COL13A1Q5TAT6 717 aaPredicted RBP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 MTDHQ86UE4 582 aaKnown RBP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 SLC22A9Q8IVM8 553 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 RBFAQ8N0V3 343 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 GPR26Q8NDV2 337 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 RHEBL1Q8TAI7 183 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 ERP27Q96DN0 273 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 MYADMQ96S97 322 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 GPR21Q99679 349 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 MTG2Q9H4K7 406 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 STN1Q9H668 368 aaKnown RBP16.62■□□□□ 0.25
CLCF1-201ENST00000312438 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 PNPOQ9NVS9 261 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 NCKIPSDQ9NZQ3 722 aa16.62■□□□□ 0.25
CLCF1-201ENST00000312438 AGAP14A8MT82 685 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 E5RI56 91 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ZBTB14O43829 449 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 NPHS1O60500 1241 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 IPO13O94829 963 aaKnown RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 CTSLP07711 333 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 LAMP2P13473 410 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TIMP2P16035 220 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UGT1A6P19224 532 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UGT1A1P22309 533 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UGT1A4P22310 534 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UGT1A3P35503 534 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UGT1A5P35504 534 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 SERPINB5P36952 375 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 SEMG2Q02383 582 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ZBTB16Q05516 673 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ACTN3Q08043 901 aaPredicted RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 MESP2Q0VG99 397 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ARHGEF7Q14155 803 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 RCN2Q14257 317 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TTC7BQ86TV6 843 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 SPNS2Q8IVW8 549 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TXNDC5Q8NBS9 432 aaKnown RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ELSPBP1Q96BH3 223 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 FAM136AQ96C01 138 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 CNDP1Q96KN2 507 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 RIPOR3Q96MK2 946 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 PLEKHG4BQ96PX9 1271 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 PLA2G2FQ9BZM2 168 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 DERL2Q9GZP9 239 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 CLPBQ9H078 707 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 LMCD1Q9NZU5 365 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 CRLS1Q9UJA2 301 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TRMT6Q9UJA5 497 aaKnown RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ZFP69BQ9UJL9 534 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TBC1D3BA6NDS4 549 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 GPR39O43194 453 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TPBGLP0DKB5 382 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ACRV1P26436 265 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 SERPINB3P29508 390 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 KCNC1P48547 511 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 SPINT3P49223 89 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 ARL13AQ5H913 290 aaPredicted RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 PIWIL4Q7Z3Z4 852 aaKnown RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 TERB1Q8NA31 727 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 STAG3L4Q8TBR4 150 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 UCMAQ8WVF2 138 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 KIAA1191Q96A73 305 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 POMKQ9H5K3 350 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 PKD2L2Q9NZM6 624 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 RAP2CQ9Y3L5 183 aa16.61■□□□□ 0.25
CLCF1-201ENST00000312438 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
CLCF1-201ENST00000312438 PDE4DIPQ5VU43 2346 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 CCDC189A1A4V9 331 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 UPK3BL1B0FP48 263 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 UPK3BL2E5RIL1 263 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 H3BMM5 538 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 NIPSNAP2O75323 286 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 ATP5HO75947 161 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 ALOX15P16050 662 aaPredicted RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 XPAP23025 273 aaPredicted RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 VIPR1P32241 457 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 HK2P52789 917 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 KDSRQ06136 332 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 PRKAA1Q13131 559 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 HNRNPA1L2Q32P51 320 aaKnown RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 FNDC3BQ53EP0 1204 aaKnown RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 CFAP157Q5JU67 520 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 PTRHD1Q6GMV3 140 aaKnown RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 CCNYL1Q8N7R7 359 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF781Q8N8C0 355 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 PTERQ96BW5 349 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 CDH19Q9H159 772 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 ZNF576Q9H609 170 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 GTSE1Q9NYZ3 720 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 GNPTGQ9UJJ9 305 aa16.6■□□□□ 0.25
CLCF1-201ENST00000312438 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 NUP210Q8TEM1 1887 aaPredicted RBP16.6■□□□□ 0.25
CLCF1-201ENST00000312438 EDDM13A0A1B0GTR0 161 aa16.59■□□□□ 0.25
CLCF1-201ENST00000312438 NEMP2A6NFY4 417 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms