RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ABCB7O75027 752 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SHMT2P34897 504 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PAQR9Q6ZVX9 377 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 FRA10AC1Q70Z53 315 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PDPRQ8NCN5 879 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ABHD11Q8NFV4 315 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SGCDQ92629 289 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PTERQ96BW5 349 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SMOQ99835 787 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 C17orf80Q9BSJ5 609 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 INTS7Q9NVH2 962 aaKnown RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SLAMF8Q9P0V8 285 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ABCD2Q9UBJ2 740 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 A0A1W2PP18 115 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MSI1O43347 362 aaKnown RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SLC22A3O75751 556 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 CYBBP04839 570 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PIRTP0C851 137 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 C7P10643 843 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 UMPSP11172 480 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MTHFRP42898 656 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 RPL34P49207 117 aaKnown RBP11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PLA2G16P53816 162 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MTPNP58546 118 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 UFM1P61960 85 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 DAG1Q14118 895 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MEP1AQ16819 746 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ATP6AP1LQ52LC2 224 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 PAGE3Q5JUK9 113 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SPESP1Q6UW49 350 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TANKQ92844 425 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 MRGPRX2Q96LB1 330 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 ASB2Q96Q27 587 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 SP110Q9HB58 689 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 EXD2Q9NVH0 621 aa11.1□□□□□ -0.63
PTPN7-201ENST00000309017 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TNPO2O14787 897 aaKnown RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 HS6ST1O60243 411 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 RHOBTB1O94844 696 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 SLC2A3P11169 496 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 DGCR6Q14129 220 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CARTPTQ16568 116 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 PAN2Q504Q3 1202 aaKnown RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 PAGE2BQ5JRK9 111 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 ANKS6Q68DC2 871 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TIGD7Q6NT04 549 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CILP2Q8IUL8 1156 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 LEMD2Q8NC56 503 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 OR7A2PQ8NGA2 310 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 ESAMQ96AP7 390 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TBATAQ96M53 351 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 HBEGFQ99075 208 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 SMURF2Q9HAU4 748 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TREX1Q9NSU2 369 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 SACM1LQ9NTJ5 587 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 MARCH4Q9P2E8 410 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 KCTD3Q9Y597 815 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 ORC6Q9Y5N6 252 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF638Q14966 1978 aaKnown RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 GLP2RO95838 553 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CSRP3P50461 194 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 POLR2JP52435 117 aaKnown RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 IST1P53990 364 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 OR4D2P58180 307 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CLCQ05315 142 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 GALNT1Q10472 559 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TTC23Q5W5X9 447 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 DNAJC14Q6Y2X3 702 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CYHR1Q6ZMK1 362 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 TOP6BLQ8N6T0 577 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 DOK1Q99704 481 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
PTPN7-201ENST00000309017 FUNDC2Q9BWH2 189 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 LIMD1Q9UGP4 676 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 PDE10AQ9Y233 779 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 ATP11BQ9Y2G3 1177 aa11.09□□□□□ -0.63
PTPN7-201ENST00000309017 PAGE1O75459 146 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.63
PTPN7-201ENST00000309017 LEPRP48357 1165 aaKnown RBP11.08□□□□□ -0.63
PTPN7-201ENST00000309017 ARSDP51689 593 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 TRIM32Q13049 653 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 SPCS2Q15005 226 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 UGT3A2Q3SY77 523 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.63
PTPN7-201ENST00000309017 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 ACOX2Q99424 681 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 HERC2P3Q9BVR0 1158 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 TOR3AQ9H497 397 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 NANOGQ9H9S0 305 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 SDR39U1Q9NRG7 319 aaPredicted RBP11.08□□□□□ -0.63
PTPN7-201ENST00000309017 RIC8BQ9NVN3 520 aa11.08□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-201ENST00000309017 G3V2T6 193 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms