RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ERVPABLB-1P60509 514 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ZFP36L1Q07352 338 aaKnown RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 NOMO1Q15155 1222 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 PCSK7Q16549 785 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 SLC30A9Q6PML9 568 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 BZW1Q7L1Q6 419 aaKnown RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ZC3H18Q86VM9 953 aaKnown RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 SLITRK4Q8IW52 837 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ARL14Q8N4G2 192 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ZDHHC1Q8WTX9 485 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 RBM41Q96IZ5 413 aaKnown RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 MRGPRX2Q96LB1 330 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 HEMGNQ9BXL5 484 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 UBP1Q9NZI7 540 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 PKD2L2Q9NZM6 624 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 TMPRSS11EQ9UL52 423 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 ATXN7L1Q9ULK2 861 aaPredicted RBP19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 SSUH2Q9Y2M2 353 aa19.67■□□□□ 0.74
PDZRN3-202ENST00000308537 A6NCN8 305 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 APOC4-APOC2K7ER74 178 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 PPM1DO15297 605 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 PMPCBO75439 489 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 APOC2P02655 101 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 PTPN7P35236 360 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 VAV2P52735 878 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 AADACL2Q6P093 401 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 MARK2Q7KZI7 788 aaKnown RBP19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 LSMEM2Q8N112 164 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 KIAA1524Q8TCG1 905 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 HTR3CQ8WXA8 447 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 P3H4Q92791 437 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 FCRL5Q96RD9 977 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 GFM1Q96RP9 751 aaKnown RBP19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 FOXP3Q9BZS1 431 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 CDH19Q9H159 772 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 C10orf88Q9H8K7 445 aa19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 FASNP49327 2511 aaKnown RBP19.66■□□□□ 0.74
PDZRN3-202ENST00000308537 ZNF106Q9H2Y7 1883 aaKnown RBP19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 CCDC187A0A096LP49 1063 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 BPIP17213 487 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 ACTR1BP42025 376 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 CHRNA4P43681 627 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 ABCG1P45844 678 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 WNT3AP56704 352 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 ACTR1AP61163 376 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 COPS2P61201 443 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 TLE3Q04726 772 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 ODF2Q5BJF6 829 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 CLEC14AQ86T13 490 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 SPACA3Q8IXA5 215 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 TTC30BQ8N4P2 665 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 Q8N9G6 341 aaPredicted RBP19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 WDR36Q8NI36 951 aaKnown RBP19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 CCHCR1Q8TD31 782 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 PRORYQ9H606 182 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 LUC7LQ9NQ29 371 aaKnown RBP19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 TRIM10Q9UDY6 481 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 FAM153AQ9UHL3 310 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 EFR3BQ9Y2G0 817 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 PRKAB1Q9Y478 270 aa19.65■□□□□ 0.74
PDZRN3-202ENST00000308537 PRR19A6NJB7 356 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 HACD1B0YJ81 288 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 MTSS1O43312 755 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 EPOP01588 193 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 CDC25BP30305 580 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 XRCC4Q13426 336 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 LRP8Q14114 963 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 KHDC1Q4VXA5 237 aaKnown RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF648Q5T619 568 aaPredicted RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF574Q6ZN55 896 aaPredicted RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 CCDC50Q8IVM0 306 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 ACTL9Q8TC94 416 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 CALR3Q96L12 384 aaKnown RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 BBC3Q96PG8 261 aaPredicted RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 VAT1Q99536 393 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 BAG1Q99933 345 aaPredicted RBP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 SYNDIG1Q9H7V2 258 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 ATXN10Q9UBB4 475 aa19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.64■□□□□ 0.73
PDZRN3-202ENST00000308537 NUAK1O60285 661 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 PYGMP11217 842 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 RBL1P28749 1068 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 CA5AP35218 305 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 INHBCP55103 352 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 PCBP4P57723 403 aaKnown RBP19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 OR1D5P58170 312 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 OTUD4Q01804 1114 aaKnown RBP19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 CFHR1Q03591 330 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 SIRPB2Q5JXA9 342 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 GALNT13Q8IUC8 556 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 TRAM1L1Q8N609 369 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 ZNF248Q8NDW4 579 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 OSBPL8Q9BZF1 889 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 ARFGAP3Q9NP61 516 aa19.63■□□□□ 0.73
PDZRN3-202ENST00000308537 ATMQ13315 3056 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 CCDC66A2RUB6 948 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 F5H423 210 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 CHUKO15111 745 aa19.62■□□□□ 0.73
PDZRN3-202ENST00000308537 ASMTLO95671 621 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms