RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 STBD1O95210 358 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 EIF1AXP47813 144 aaKnown RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 NOMO3P69849 1222 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 TMEM119Q4V9L6 283 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 C4orf19Q8IY42 314 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 LPGAT1Q92604 370 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 ZNF132P52740 706 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SF1Q15637 639 aaKnown RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 FBXO42Q6P3S6 717 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 LIX1Q8N485 282 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 GALNT11Q8NCW6 608 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 CEP170BQ9Y4F5 1589 aaPredicted RBP12.59□□□□□ -0.39
USP38-201ENST00000307017 TECPR2O15040 1411 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SLC10A7Q0GE19 358 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SMU1Q2TAY7 513 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 FRMD7Q6ZUT3 714 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 OR5M3Q8NGP4 307 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SLC39A3Q9BRY0 314 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 C1QTNF1Q9BXJ1 281 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 SPEF1Q9Y4P9 236 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 FADS3Q9Y5Q0 445 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 UMODL1Q5DID0 1318 aa12.59□□□□□ -0.39
USP38-201ENST00000307017 NT5EP21589 574 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 PDK4Q16654 411 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 KHDC1Q4VXA5 237 aaKnown RBP12.58□□□□□ -0.39
USP38-201ENST00000307017 C9orf64Q5T6V5 341 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.39
USP38-201ENST00000307017 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 PPCDCQ96CD2 204 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 FBXO44Q9H4M3 255 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 RPS6KA6Q9UK32 745 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 NR2E1Q9Y466 385 aa12.58□□□□□ -0.39
USP38-201ENST00000307017 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 MAP2K7O14733 419 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TRBC1P01850 177 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 FDX1P10109 184 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 AHCYP23526 432 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 CD40LGP29965 261 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TPTEP56180 551 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ENPEPQ07075 957 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 OLIG2Q13516 323 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ZNHIT3Q15649 155 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 PLPP4Q5VZY2 271 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 IQCHQ86VS3 1027 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 FAM13CQ8NE31 585 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 OR4L1Q8NH43 312 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 IL31RAQ8NI17 732 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 CCR10P46092 362 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 NR1H2P55055 460 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ECHDC2Q86YB7 292 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 CBR4Q8N4T8 237 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 OR10A6Q8NH74 314 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SUSD6Q92537 303 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ITCHQ96J02 903 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 MED28Q9H204 178 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 SNX7Q9UNH6 387 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 AZIN1O14977 448 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TNFSF12O43508 249 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 PTGS2P35354 604 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 NR0B1P51843 470 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 POLR2JP52435 117 aaKnown RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 UGT8Q16880 541 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TTC23Q5W5X9 447 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 DGLUCYQ7Z3D6 616 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 HJURPQ8NCD3 748 aaPredicted RBP12.58□□□□□ -0.4
USP38-201ENST00000307017 OR5AK3PQ8NH89 298 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 RNF157Q96PX1 679 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TTYH2Q9BSA4 534 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 DNAJC11Q9NVH1 559 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TNFSF13BQ9Y275 285 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 TRAF6Q9Y4K3 522 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 ADCY10Q96PN6 1610 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 CPS1P31327 1500 aa12.58□□□□□ -0.4
USP38-201ENST00000307017 DNAJA2O60884 412 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms