RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 AJAP1Q9UKB5 411 aaPredicted RBP15.88■□□□□ 0.13
USP42-201ENST00000306177 ZNF780BQ9Y6R6 833 aa15.88■□□□□ 0.13
USP42-201ENST00000306177 ZNF536O15090 1300 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 LOC100506127A0A0U1RQW1 187 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 H3BM21 787 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 GSC2O15499 205 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 STK16O75716 305 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 ZNF618Q5T7W0 954 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 NAIF1Q69YI7 327 aaPredicted RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 NIPA2Q8N8Q9 360 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 OR7D4Q8NG98 312 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TWIST2Q8WVJ9 160 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 MCRS1Q96EZ8 462 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 LRTM1Q9HBL6 345 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 CA12O43570 354 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 APODP05090 189 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 AP1S1P61966 158 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 SP2Q02086 613 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 MTAPQ13126 283 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 OR7A2PQ8NGA2 310 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 MYOCQ99972 504 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 FNDC11Q9BVV2 318 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 ACAT2Q9BWD1 397 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 RHOBTB2Q9BYZ6 727 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 IMP3Q9NV31 184 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3DA0A087WVF3 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3IA0A087WXS9 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3EA0A087X179 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3KA0A087X1G2 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3FA6NER0 549 aaPredicted RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3LB9A6J9 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 AP3D1O14617 1153 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 WBP4O75554 376 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 CDK14O94921 469 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3HP0C7X1 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 CYP1B1Q16678 543 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3GQ6DHY5 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3CQ6IPX1 549 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D3Q8IZP1 549 aaPredicted RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 MCCC1Q96RQ3 725 aaPredicted RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 TRMT13Q9NUP7 481 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 OR10H3O60404 316 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 STBD1O95210 358 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 TRBC1P01850 177 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 RPL5P46777 297 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 TBC1D21Q8IYX1 336 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 SMG7Q92540 1137 aaKnown RBP15.87■□□□□ 0.13
USP42-201ENST00000306177 IGSF9Q9P2J2 1179 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
USP42-201ENST00000306177 CHURC1-FNTBB4DL54 471 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 PRNPP04156 253 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 FOLH1Q04609 750 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 CCL14Q16627 93 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 FSTL4Q6MZW2 842 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 C11orf88Q6PI97 169 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 LDB1Q86U70 411 aaPredicted RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 ECHDC2Q86YB7 292 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 TSSK3Q96PN8 268 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 AIF1LQ9BQI0 150 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 MIR1-1HGQ9H1L0 117 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 AP4B1Q9Y6B7 739 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 YJEFN3A6XGL0 299 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 LGR5O75473 907 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 MT-CYBP00156 380 aaPredicted RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 NMBRP28336 390 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 GPD2P43304 727 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 POLR2JP52435 117 aaKnown RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 TMEM192Q8IY95 271 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP42-201ENST00000306177 OR10G6Q8NH81 332 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 ZNF516Q92618 1163 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 FUBP3Q96I24 572 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP42-201ENST00000306177 APOLD1Q96LR9 279 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 SAMD4AQ9UPU9 718 aaKnown RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 SIN3BO75182 1162 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 DPYSL2Q16555 572 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 ARL13AQ5H913 290 aaPredicted RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 HEATR4Q86WZ0 1026 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 SIAH1Q8IUQ4 282 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 PHYKPLQ8IUZ5 450 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 CLIP3Q96DZ5 547 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 POLR1BQ9H9Y6 1135 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 GRHL1Q9NZI5 618 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 DTLQ9NZJ0 730 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 HLA-DQA2P01906 255 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 CCNYL3P0C7X3 344 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 ZNF37AP17032 561 aaPredicted RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 SSR2P43308 183 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 MANFP55145 182 aaKnown RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 ESRP1Q6NXG1 681 aaKnown RBP15.86■□□□□ 0.13
USP42-201ENST00000306177 PQLC1Q8N2U9 271 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 MOSPD2Q8NHP6 518 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 PCDHGC4Q9Y5F7 938 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 SNX10Q9Y5X0 201 aa15.86■□□□□ 0.13
USP42-201ENST00000306177 PLIN3O60664 434 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 FGBP02675 491 aa15.85■□□□□ 0.13
USP42-201ENST00000306177 INHAP05111 366 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms