RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ADPRMQ3LIE5 342 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CATSPEREQ5SY80 951 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 DEPDC1Q5TB30 811 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ESRP1Q6NXG1 681 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 CHST15Q7LFX5 561 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 TSEN54Q7Z6J9 526 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 CALHM3Q86XJ0 350 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SULF1Q8IWU6 871 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PGBD5Q8N414 524 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ABHD11Q8NFV4 315 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CCDC126Q96EE4 140 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 IMP4Q96G21 291 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 MRPL57Q9BQC6 102 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 DHX35Q9H5Z1 703 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 AKTIPQ9H8T0 292 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PFDN4Q9NQP4 134 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ENTPD7Q9NQZ7 604 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 QPCTLQ9NXS2 382 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GIMAP2Q9UG22 337 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SLCO3A1Q9UIG8 710 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 OSGIN1Q9UJX0 560 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ERVK-11Q9UQG0 969 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TMEM98Q9Y2Y6 226 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MAGED1Q9Y5V3 778 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 LTBP2Q14767 1821 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 LRRK1Q38SD2 2015 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CCDC162PA2VCL2 907 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 LRRC14BA6NHZ5 514 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 EEF2KO00418 725 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 NRP2O60462 931 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CLASP2O75122 1294 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 KCNK2O95069 426 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZBTB11O95625 1053 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZDHHC11BP0C7U3 371 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS50-202ENST00000305866 JUNDP17535 347 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CAPGP40121 348 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MAGEA11P43364 429 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CCR3P51677 355 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TUBA3CQ13748 450 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 OR4D1Q15615 310 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TYSND1Q2T9J0 566 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GLRA4Q5JXX5 417 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 KCTD8Q6ZWB6 473 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 OTOP3Q7RTS5 596 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PLEKHH3Q7Z736 793 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 DEFB132Q7Z7B7 95 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CRIPAKQ8N1N5 446 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 RHEBL1Q8TAI7 183 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 NUDT8Q8WV74 236 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GFM2Q969S9 779 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 SMARCD1Q96GM5 515 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 RNF170Q96K19 258 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FEM1AQ9BSK4 669 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MUC13Q9H3R2 512 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PDFQ9HBH1 243 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FAM49BQ9NUQ9 324 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 VNN3Q9NY84 501 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 KLQ9UEF7 1012 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GJA3Q9Y6H8 435 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 DENND4AQ7Z401 1863 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 UNC80Q8N2C7 3258 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 hCG_2014768A0A024R1R8 64 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GOLGA8TH3BQL2 631 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NEMP1O14524 444 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 IRAK2O43187 625 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MSI1O43347 362 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 LDB2O43679 373 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TBC1D4O60343 1298 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BCAS1O75363 584 aaPredicted RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 C1QCP02747 245 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GSTT2P0CG29 244 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 GSTT2BP0CG30 244 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HOXA9P31269 272 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HPCAL1P37235 193 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 MAGEA2P43356 314 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CHRNA4P43681 627 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 RABGGTBP53611 331 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 NUP107P57740 925 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 EMX2Q04743 252 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ADIGQ0VDE8 80 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PARP15Q460N3 678 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 ZFYVE27Q5T4F4 411 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 C6orf163Q5TEZ5 329 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 TRAF7Q6Q0C0 670 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 FKBP9P1Q75LS8 142 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PRSS48Q7RTY5 328 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PIWIL4Q7Z3Z4 852 aaKnown RBP5.42□□□□□ -1.54
VPS50-202ENST00000305866 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 DPP9Q86TI2 863 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 CUZD1Q86UP6 607 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SERINC5Q86VE9 423 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 PARP8Q8N3A8 854 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 BMPERQ8N8U9 685 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 APH1BQ8WW43 257 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 SEPT8Q92599 483 aa5.42□□□□□ -1.54
VPS50-202ENST00000305866 HDAC10Q969S8 669 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms