RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ICA1LQ8NDH6 482 aa18.55■□□□□ 0.56
RNF139-201ENST00000303545 CDK5RAP1Q96SZ6 601 aaKnown RBP18.55■□□□□ 0.56
RNF139-201ENST00000303545 CWH43Q9H720 699 aa18.55■□□□□ 0.56
RNF139-201ENST00000303545 TRIM38O00635 465 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 STX7O15400 261 aaKnown RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 CRCPO75575 148 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 BCAS2O75934 225 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 NFKB2Q00653 900 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 FOLH1Q04609 750 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 MED21Q13503 144 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 CTSL3PQ5NE16 218 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 OGFRL1Q5TC84 451 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 TXNDC8Q6A555 127 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 RETREG3Q86VR2 466 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 PLD4Q96BZ4 506 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 TRMOQ9BU70 441 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 KLF16Q9BXK1 252 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 VCX3BQ9H321 246 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 INTS10Q9NVR2 710 aaKnown RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 ENO4A6NNW6 628 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 PRRG1O14668 218 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 RNASEH2AO75792 299 aaKnown RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 STX1BP61266 288 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 GALNT1Q10472 559 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 C18orf21Q32NC0 220 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 CPNE9Q8IYJ1 553 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 PAF1Q8N7H5 531 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 ARL14EPQ8N8R7 260 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 PDZD8Q8NEN9 1154 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 ZNF461Q8TAF7 563 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 STAG3L4Q8TBR4 150 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 FAM110BQ8TC76 370 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 KIAA1191Q96A73 305 aa18.54■□□□□ 0.56
RNF139-201ENST00000303545 FUBP1Q96AE4 644 aaKnown RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 NR1H4Q96RI1 486 aaPredicted RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 TFB2MQ9H5Q4 396 aaKnown RBP18.54■□□□□ 0.56
RNF139-201ENST00000303545 NRP2O60462 931 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 KERAO60938 352 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 SNUPNO95149 360 aaKnown RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 GPX3P22352 226 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 RFTN1Q14699 578 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 ACBD5Q5T8D3 534 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 ZNF296Q8WUU4 475 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 PEX13Q92968 403 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CDK15Q96Q40 435 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ACOX2Q99424 681 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 AFF4Q9UHB7 1163 aaKnown RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 A0A0J9YYE9 177 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CASQ2O14958 399 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 HGFP14210 728 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CA5AP35218 305 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ARL1P40616 181 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 SLC7A2P52569 658 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 RHOAP61586 193 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ADGRE1Q14246 886 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 GK3PQ14409 553 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CAPRIN1Q14444 709 aaKnown RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 RBBP7Q16576 425 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 GSTA3Q16772 222 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ARMC3Q5W041 872 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 STON2Q8WXE9 905 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 EID2BQ96D98 161 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 LINGO1Q96FE5 620 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 SYTL2Q9HCH5 934 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 RIMS3Q9UJD0 308 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 GBF1Q92538 1859 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CSKP41240 450 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 CCNHP51946 323 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 HK3P52790 923 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 DIO3P55073 304 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 DNAJB7Q7Z6W7 309 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 CAMK1DQ8IU85 385 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 SLAIN1Q8ND83 568 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 RHEBL1Q8TAI7 183 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 DERL2Q9GZP9 239 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ZNF334Q9HCZ1 680 aaPredicted RBP18.53■□□□□ 0.56
RNF139-201ENST00000303545 ZDHHC7Q9NXF8 308 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 POLG2Q9UHN1 485 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 TBC1D30Q9Y2I9 924 aa18.53■□□□□ 0.56
RNF139-201ENST00000303545 ANAPC1Q9H1A4 1944 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 E5RI56 91 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 KIF3CO14782 793 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 PKMP14618 531 aaKnown RBP18.52■□□□□ 0.56
RNF139-201ENST00000303545 APLP1P51693 650 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 BTG3Q14201 252 aaPredicted RBP18.52■□□□□ 0.56
RNF139-201ENST00000303545 TLR1Q15399 786 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 MAPRE2Q15555 327 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 KANK2Q63ZY3 851 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 LYSMD3Q7Z3D4 306 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 TMEM150AQ86TG1 271 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 HBEGFQ99075 208 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 SLC25A23Q9BV35 468 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 ADGRE3Q9BY15 652 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 C6orf203Q9P0P8 240 aaPredicted RBP18.52■□□□□ 0.56
RNF139-201ENST00000303545 LHX3Q9UBR4 397 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 TRMT6Q9UJA5 497 aaKnown RBP18.52■□□□□ 0.56
RNF139-201ENST00000303545 CROTQ9UKG9 612 aa18.52■□□□□ 0.56
RNF139-201ENST00000303545 SMAD6O43541 496 aaKnown RBP18.52■□□□□ 0.55
RNF139-201ENST00000303545 CES1P23141 567 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms