RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TEFMQ96QE5 360 aaKnown RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 DENND2DQ9H6A0 471 aaPredicted RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 GSAPA4D1B5 854 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 GPR25O00155 361 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 RHAGQ02094 409 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 REP15Q6BDI9 236 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 AP3S1Q92572 193 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TRIT1Q9H3H1 467 aaKnown RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 KCTD5Q9NXV2 234 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TCAF1Q9Y4C2 921 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 MYOM1P52179 1685 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 H7C0S8 307 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 UGT2B11O75310 529 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 NDST3O95803 873 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 CHRNGP07510 517 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 PTPN9P43378 593 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 GIPC3Q8TF64 312 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 PRDM8Q9NQV8 689 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 CHPFQ8IZ52 775 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 ZBTB2Q8N680 514 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 TBATAQ96M53 351 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 SSU72Q9NP77 194 aaKnown RBP13.88□□□□□ -0.19
PRKCB-201ENST00000303531 COL20A1Q9P218 1284 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 RAB23Q9ULC3 237 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF510Q9Y2H8 683 aa13.88□□□□□ -0.19
PRKCB-201ENST00000303531 RHOQP17081 205 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CTSKP43235 329 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 FBXO48Q5FWF7 155 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 METTL21CQ5VZV1 264 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 NR2F6P10588 404 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CAPN13Q6MZZ7 669 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CXXC5Q7LFL8 322 aaKnown RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF781Q8N8C0 355 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 KLHL23Q8NBE8 558 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 STYXQ8WUJ0 223 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 LENG8Q96PV6 779 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 MYOCQ99972 504 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RACGAP1Q9H0H5 632 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CCL22O00626 93 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF24P17028 368 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RNF220Q5VTB9 566 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 DCBLD1Q8N8Z6 715 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 MCMBPQ9BTE3 642 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 COQ6Q9Y2Z9 468 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 LRRC14BA6NHZ5 514 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 PTPN5P54829 565 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 TRIM32Q13049 653 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 FAM46CQ5VWP2 391 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 TMPRSS11BQ86T26 416 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RAD51AP1Q96B01 352 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 GORASP1Q9BQQ3 440 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RASSF1Q9NS23 344 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 PDP1Q9P0J1 537 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 DNM1LO00429 736 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 NMBRP28336 390 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 KIR3DL1P43629 444 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 SP3Q02447 781 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 MBTD1Q05BQ5 628 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 INTS6LQ5JSJ4 861 aaKnown RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RFWD3Q6PCD5 774 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 TDRPQ86YL5 185 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RGL4Q8IZJ4 473 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 TCAIMQ8N3R3 496 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 OR8D1Q8WZ84 308 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 APOBEC3GQ9HC16 384 aaKnown RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 DNAJC11Q9NVH1 559 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 ZNF222Q9UK12 451 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 PLIN3O60664 434 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 UGT2B17O75795 530 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 PLA2G4EQ3MJ16 856 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 CHSY3Q70JA7 882 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 OR10G6Q8NH81 332 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 VANGL1Q8TAA9 524 aaPredicted RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 DNAJC1Q96KC8 554 aaKnown RBP13.87□□□□□ -0.19
PRKCB-201ENST00000303531 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
PRKCB-201ENST00000303531 ABLIM1O14639 778 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 TREHO43280 583 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 HOXB6P17509 224 aaKnown RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 HTR1BP28222 390 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
PRKCB-201ENST00000303531 CAPGP40121 348 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 ACAP2Q15057 778 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 CES5AQ6NT32 575 aa13.86□□□□□ -0.19
PRKCB-201ENST00000303531 SLC34A3Q8N130 599 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms