RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 INTS6LQ5JSJ4 861 aaKnown RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 ANKRD46Q86W74 232 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 CPNE9Q8IYJ1 553 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 ZFP28Q8NHY6 868 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 STYXQ8WUJ0 223 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 FBXL20Q96IG2 436 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 OLFM1Q99784 485 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 RIBC2Q9H4K1 309 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 CACNA2D2Q9NY47 1150 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 MARCH4Q9P2E8 410 aaPredicted RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 UBA2Q9UBT2 640 aaPredicted RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 CNOT6Q9ULM6 557 aaKnown RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 SZT2Q5T011 3432 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 DEAF1O75398 565 aaPredicted RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 HIST1H2AGP0C0S8 130 aaPredicted RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 HIST1H2ADP20671 130 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 WARSP23381 471 aaKnown RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 C21orf59P57076 290 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 DMC1Q14565 340 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 MYLK3Q32MK0 819 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 POM121L1PQ3SYA9 428 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 FAM45BPQ6NSW5 357 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 XKR5Q6UX68 686 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 GALNT5Q7Z7M9 940 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 TRPV1Q8NER1 839 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 FAM45AQ8TCE6 357 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 FAM120BQ96EK7 910 aaKnown RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 HIST1H2AHQ96KK5 128 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 HIST1H2AJQ99878 128 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 H2AFJQ9BTM1 129 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 POLR3HQ9Y535 204 aaPredicted RBP13.99□□□□□ -0.17
SDC2-201ENST00000302190 NME7Q9Y5B8 376 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 ACTL7AQ9Y615 435 aa13.99□□□□□ -0.17
SDC2-201ENST00000302190 PLXNA1Q9UIW2 1896 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 PRORSD1PA6NEY8 169 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 IRAK2O43187 625 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 GRID2O43424 1007 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 CA12O43570 354 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 NIPSNAP2O75323 286 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 HSMCR30P0CW71 290 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 PPP3CCP48454 512 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 DGKQP52824 942 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 NAA20P61599 178 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 RPS24P62847 133 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 CDKL1Q00532 357 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 SULT2A1Q06520 285 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 FAM98BQ52LJ0 330 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 ALFQ53S48 1182 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 FAM151BQ6UXP7 276 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ANKRD49Q8WVL7 239 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ASPSCR1Q9BZE9 553 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 KATNBL1Q9H079 304 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 EXOSC4Q9NPD3 245 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 TLR8Q9NR97 1041 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 RAB26Q9ULW5 256 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 TMEM221A6NGB7 291 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 CKMP06732 381 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 AKR1A1P14550 325 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 HOXD12P35452 270 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 NUP107P57740 925 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 CLCQ05315 142 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 GALNT2Q10471 571 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ADRM1Q16186 407 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 LRRC8DQ7L1W4 858 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 GLT1D1Q96MS3 346 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 GJD2Q9UKL4 321 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 CDC7O00311 574 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 NOBOXO60393 691 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 MC4RP32245 332 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 PWP1Q13610 501 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 GRB7Q14451 532 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 LPIN1Q14693 890 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 PLD3Q8IV08 490 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 PNPT1Q8TCS8 783 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 PPP1R2P1Q96PQ5 205 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 SLC29A1Q99808 456 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 ADI1Q9BV57 179 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 FBXO44Q9H4M3 255 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 CXorf21Q9HAI6 301 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 UBAP1Q9NZ09 502 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 EIF3LQ9Y262 564 aaKnown RBP13.98□□□□□ -0.17
SDC2-201ENST00000302190 INVSQ9Y283 1065 aa13.98□□□□□ -0.17
SDC2-201ENST00000302190 NUMA1Q14980 2115 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 C16orf96A6NNT2 1141 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 PTGESO14684 152 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 SLC22A3O75751 556 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 H6PDO95479 791 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 ESRRBO95718 433 aa13.97□□□□□ -0.17
SDC2-201ENST00000302190 POU1F1P28069 291 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms