RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CLEC4FQ8N1N0 589 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 IPMKQ8NFU5 416 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TWIST2Q8WVJ9 160 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 S100ZQ8WXG8 99 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CELF6Q96J87 481 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ZMAT2Q96NC0 199 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 FDXACB1Q9BRP7 624 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 AMBRA1Q9C0C7 1298 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 INTS7Q9NVH2 962 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 BTRCQ9Y297 605 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ANKRD34BA5PLL1 514 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CDK14O94921 469 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 NADKO95544 446 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 UMPSP11172 480 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 IMPDH1P20839 514 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 FSHRP23945 695 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ADAM17P78536 824 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 FOXM1Q08050 763 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CD47Q08722 323 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 DMPKQ09013 629 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TMEM207Q6UWW9 146 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 HS3ST5Q8IZT8 346 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ATP6V0D2Q8N8Y2 350 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 OR7A2PQ8NGA2 310 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CAPSLQ8WWF8 208 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 EXT2Q93063 718 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ZBED3Q96IU2 234 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 DHRS1Q96LJ7 313 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 MBOAT4Q96T53 435 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 GPR20Q99678 358 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CLSTN3Q9BQT9 956 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 HOXD1Q9GZZ0 328 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 FBXO8Q9NRD0 319 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 EXD2Q9NVH0 621 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 POLG2Q9UHN1 485 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ZNF229Q9UJW7 825 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 A0A1B0GTL3 188 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 DYTNA2CJ06 578 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 SIX3O95343 332 aaPredicted RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 ITIH1P19827 911 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 CD40LGP29965 261 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 ADRA1BP35368 520 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 ZFP36L2P47974 494 aaKnown RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 CRY1Q16526 586 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 LRIT3Q3SXY7 679 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 TAF2Q6P1X5 1199 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 CLYBLQ8N0X4 340 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 PIK3C3Q8NEB9 887 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 OR6Q1Q8NGQ2 317 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 HTRA1Q92743 480 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 SDCCAG3Q96C92 435 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 TBL1YQ9BQ87 522 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 TRMOQ9BU70 441 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 FICDQ9BVA6 458 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 MUC13Q9H3R2 512 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 SMURF2Q9HAU4 748 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 MAGEE1Q9HCI5 957 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 TREX1Q9NSU2 369 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 SLCO3A1Q9UIG8 710 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 NDUFS2O75306 463 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 DDNO94850 711 aaPredicted RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 PRSS23O95084 383 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 EIF2S1P05198 315 aaKnown RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 HGFP14210 728 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 VBP1P61758 197 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 ARHGAP36Q6ZRI8 547 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 MMAAQ8IVH4 418 aaKnown RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 SLC22A9Q8IVM8 553 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 LGI2Q8N0V4 545 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 WNT8BQ93098 351 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 C18orf25Q96B23 403 aaPredicted RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 PTERQ96BW5 349 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 TUBGCP3Q96CW5 907 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 L3HYPDHQ96EM0 354 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 HSFY1Q96LI6 401 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 NSUN5Q96P11 429 aaKnown RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 ATXN3LQ9H3M9 355 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 WDR6Q9NNW5 1121 aaKnown RBP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
ZNF558-201ENST00000301475 FAM118AQ9NWS6 357 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 NAALAD2Q9Y3Q0 740 aa10.83□□□□□ -0.68
ZNF558-201ENST00000301475 UBXN8O00124 270 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 SLC1A7O00341 560 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NCAM2O15394 837 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NOBOXO60393 691 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 BEST1O76090 585 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 C1RP00736 705 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 RBP1P09455 135 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 CASP2P42575 452 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ACADSBP45954 432 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 GABARAPL2P60520 117 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 TNFAIP1Q13829 316 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NOL9Q5SY16 702 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 GPR158Q5T848 1215 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 PIM3Q86V86 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms