RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CCDC68Q9H2F9 335 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF696Q9H7X3 374 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 SPC25Q9HBM1 224 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PCDH12Q9NPG4 1184 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 SLC22A2O15244 555 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 HGFP14210 728 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 IMPDH1P20839 514 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 DNAJB13P59910 316 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 RHDQ02161 417 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 MS4A13Q5J8X5 152 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 TBCELQ5QJ74 424 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 ZNF678Q5SXM1 525 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 KIAA0408Q6ZU52 694 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
CTDP1-202ENST00000299543 MAELQ96JY0 434 aaKnown RBP13.4□□□□□ -0.26
CTDP1-202ENST00000299543 LAMA2P24043 3122 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 H3BMM5 538 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 ALDOCP09972 364 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 CSRP3P50461 194 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 KCNJ8Q15842 424 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 GPR107Q5VW38 600 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 RETREG3Q86VR2 466 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 AHI1Q8N157 1196 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 DDI1Q8WTU0 396 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 VPS33AQ96AX1 596 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 NSMCE3Q96MG7 304 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 HBEGFQ99075 208 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 HAUS8Q9BT25 410 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 MEAF6Q9HAF1 191 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 DNAJC15Q9Y5T4 150 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 CLIC3O95833 236 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 IGLV3-25P01717 112 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 PABPC1P11940 636 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 IKBKEQ14164 716 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 NR1D2Q14995 579 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 FAM209AQ5JX71 171 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 CLYBLQ8N0X4 340 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 SCAIQ8N9R8 606 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 PCYOX1LQ8NBM8 494 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 VPS50Q96JG6 964 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 OSBPL10Q9BXB5 764 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
CTDP1-202ENST00000299543 ST14Q9Y5Y6 855 aa13.39□□□□□ -0.27
CTDP1-202ENST00000299543 B4GALT3O60512 393 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF26P17031 533 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 POLD2P49005 469 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 YBX1P67809 324 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 GPR141Q7Z602 305 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 FUNDC1Q8IVP5 155 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 TWIST2Q8WVJ9 160 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CAPSLQ8WWF8 208 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 C1orf50Q9BV19 199 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 EHD1Q9H4M9 534 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 VPS28Q9UK41 221 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CNOT6Q9ULM6 557 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 RNF112Q9ULX5 631 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 INPP4BO15327 924 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CDK14O94921 469 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 DIO3P55073 304 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 TRAF2Q12933 501 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 RFTN1Q14699 578 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 OR4D1Q15615 310 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MANEALQ5VSG8 457 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MON1AQ86VX9 555 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 PGBD5Q8N414 524 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 CYGBQ8WWM9 190 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 FAM193BQ96PV7 902 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 EPS8L2Q9H6S3 715 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MARCH2Q9P0N8 246 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 TNFRSF10BO14763 440 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 AZIN1O14977 448 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MTHFD1P11586 935 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 NCK1P16333 377 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 ATP6V1B2P21281 511 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 EEF1DP29692 281 aaKnown RBP13.38□□□□□ -0.27
CTDP1-202ENST00000299543 APLP1P51693 650 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 NUP107P57740 925 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 SEMA3AQ14563 771 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 MRNIPQ6NTE8 343 aa13.38□□□□□ -0.27
CTDP1-202ENST00000299543 KIAA2013Q8IYS2 634 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms