RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ILF3Q12906 894 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCF11-201ENST00000298281 ANKRD26P1Q6NSI1 321 aa12.03□□□□□ -0.48
PCF11-201ENST00000298281 ARCQ7LC44 396 aa12.03□□□□□ -0.48
PCF11-201ENST00000298281 KBTBD8Q8NFY9 601 aa12.03□□□□□ -0.48
PCF11-201ENST00000298281 GMPPBQ9Y5P6 360 aa12.03□□□□□ -0.48
PCF11-201ENST00000298281 H3BQF6 201 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 MID1O15344 667 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.48
PCF11-201ENST00000298281 RIDAP52758 137 aaKnown RBP12.02□□□□□ -0.48
PCF11-201ENST00000298281 ZBTB6Q15916 424 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 NUP54Q7Z3B4 507 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 NAT16Q8N8M0 369 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 C12orf50Q8NA57 414 aaPredicted RBP12.02□□□□□ -0.48
PCF11-201ENST00000298281 ZNF540Q8NDQ6 660 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 RDH11Q8TC12 318 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 LRRC20Q8TCA0 184 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 PIH1D2Q8WWB5 315 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 ZHX1-C8orf76Q96EF9 292 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 ASB8Q9H765 288 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 SH3BGRL2Q9UJC5 107 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 BAIAP2Q9UQB8 552 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 ZNF823P16415 610 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 PPATQ06203 517 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 BNIP3Q12983 259 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 LY6KQ17RY6 165 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 FAM131AQ6UXB0 335 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 TRPV1Q8NER1 839 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 PHB2Q99623 299 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 RTKNQ9BST9 563 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 TAPBPLQ9BX59 468 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 CEP41Q9BYV8 373 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 PIH1D1Q9NWS0 290 aaKnown RBP12.02□□□□□ -0.48
PCF11-201ENST00000298281 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.02□□□□□ -0.48
PCF11-201ENST00000298281 GNG13Q9P2W3 67 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 MYO3AQ8NEV4 1616 aa12.02□□□□□ -0.48
PCF11-201ENST00000298281 METTL21EPA6NDL7 271 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 SNRPB2P08579 225 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 ADORA2AP29274 412 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 CREB5Q02930 508 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 MADCAM1Q13477 382 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 UBE2J2Q8N2K1 259 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 B3GNT4Q9C0J1 378 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 USP17L7P0C7H9 530 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 RARAP10276 462 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 BDNFP23560 247 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 UAP1L1Q3KQV9 507 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 ZIK1Q3SY52 487 aaPredicted RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 COMTD1Q86VU5 262 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 KAT2AQ92830 837 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 RADILQ96JH8 1075 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 IMP3Q9NV31 184 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 MTF2Q9Y483 593 aaPredicted RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 AHCYP23526 432 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 KDELR1P24390 212 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 OR3A3P47888 321 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 OR3A2P47893 321 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 SP3Q02447 781 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 PFKFB4Q16877 469 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 TMEM119Q4V9L6 283 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 FNBP1LQ5T0N5 605 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 C1orf186Q6ZWK4 172 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 FAM129CQ86XR2 697 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 NELL1Q92832 810 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 NXPE2Q96DL1 559 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 GAL3ST4Q96RP7 486 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 TLL1O43897 1013 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 HSD11B1P28845 292 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 ACVR2BQ13705 512 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 BEND7Q8N7W2 519 aaPredicted RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 STK32AQ8WU08 396 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 SIPA1Q96FS4 1042 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 TEFMQ96QE5 360 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 MRPL57Q9BQC6 102 aaKnown RBP12.02□□□□□ -0.49
PCF11-201ENST00000298281 BRD9Q9H8M2 597 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 RRAGCQ9HB90 399 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 ETNK2Q9NVF9 386 aa12.02□□□□□ -0.49
PCF11-201ENST00000298281 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 TSPAN4O14817 238 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 RECQL4O94761 1208 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 DHFRP00374 187 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 STOMP27105 288 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CCNYL2Q5T2Q4 361 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 CEP295NLQ96MC4 621 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 RNF208Q9H0X6 261 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ASAH2Q9NR71 780 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MADDQ8WXG6 1647 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 B8ZZF3 427 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 SLITRK3O94933 977 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 SEC24AO95486 1093 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 OTCP00480 354 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PCSK2P16519 638 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ATP6V0D1P61421 351 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms