RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CD274Q9NZQ7 290 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 FBP2O00757 339 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 CSF2RAP15509 400 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 NCK1P16333 377 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 HOXD10P28358 340 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 CTSOP43234 321 aaPredicted RBP13.47□□□□□ -0.25
TTC39B-201ENST00000297615 POU4F1Q01851 419 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 LYSMD3Q7Z3D4 306 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 CLHC1Q8NHS4 586 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 HMGCLL1Q8TB92 370 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 MPP4Q96JB8 637 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 LIN28AQ9H9Z2 209 aaKnown RBP13.47□□□□□ -0.25
TTC39B-201ENST00000297615 AP4S1Q9Y587 144 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 CPQQ9Y646 472 aa13.47□□□□□ -0.25
TTC39B-201ENST00000297615 PSMD3O43242 534 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CNPP09543 421 aaKnown RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 GABRR2P28476 465 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CDH15P55291 814 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 PLOD1Q02809 727 aaPredicted RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 TRAF2Q12933 501 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CWF19L1Q69YN2 538 aaKnown RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF683Q8IZ20 524 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 SLC22A15Q8IZD6 547 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 OR10Q1Q8NGQ4 319 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 RDH11Q8TC12 318 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CACNA2D2Q9NY47 1150 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 SLAMF8Q9P0V8 285 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 HEMK1Q9Y5R4 338 aaPredicted RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 RAD54BQ9Y620 910 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 TMCC1O94876 653 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 IGHA2P01877 340 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CSKP41240 450 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CBLBQ13191 982 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 TCEA2Q15560 299 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF648Q5T619 568 aaPredicted RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 CMTM8Q8IZV2 173 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 GALNT15Q8N3T1 639 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
TTC39B-201ENST00000297615 PCDHGA7Q9Y5G6 932 aa13.46□□□□□ -0.25
TTC39B-201ENST00000297615 HGFP14210 728 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 KRT80Q6KB66 452 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TSPAN33Q86UF1 283 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CDC26Q8NHZ8 85 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 SLC29A1Q99808 456 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CORO1BQ9BR76 489 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 AKTIPQ9H8T0 292 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 PRDM16Q9HAZ2 1276 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TRPM7Q96QT4 1865 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 GREB1Q4ZG55 1949 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 A0A087X1B8 175 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 ANTXRLA6NF34 631 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CLGNO14967 610 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CLDN7O95471 211 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 MTHFD1P11586 935 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 EFNA1P20827 205 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 ITGB8P26012 769 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 NADK2Q4G0N4 442 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 UNC50Q53HI1 259 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 OGFRL1Q5TC84 451 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 UGT2A3Q6UWM9 527 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CANT1Q8WVQ1 401 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TMEM79Q9BSE2 394 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 SCN5AQ14524 2016 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 NYNRINQ9P2P1 1898 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 MYLKQ15746 1914 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 CCL16O15467 120 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 RFPL2O75678 378 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 ALDOCP09972 364 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 ROR2Q01974 943 aaKnown RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 MRNIPQ6NTE8 343 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
TTC39B-201ENST00000297615 FAM126BQ8IXS8 530 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 C19orf60Q96EN9 201 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 LINGO1Q96FE5 620 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TEX37Q96LM6 180 aa13.45□□□□□ -0.26
TTC39B-201ENST00000297615 TMEM74Q96NL1 305 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms