RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MPP1Q00013 466 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 HSF2Q03933 536 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 CNSTQ6PJW8 725 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 ZBTB8BQ8NAP8 495 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PHF11Q9UIL8 331 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PMM2O15305 246 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 RAP2AP10114 183 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 NR4A1P22736 598 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 ACADVLP49748 655 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 RHAGQ02094 409 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 CLCQ05315 142 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 CPTPQ5TA50 214 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 EEF1DP3Q658K8 133 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 FAM156AQ8NDB6 213 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 MED28Q9H204 178 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 KCNE2Q9Y6J6 123 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 A0A1W2PRG6 482 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 AP3D1O14617 1153 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A9O60656 530 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 C9P02748 559 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 RPLP0P05388 317 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PKMP14618 531 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A6P19224 532 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A1P22309 533 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A4P22310 534 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 MC4RP32245 332 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A3P35503 534 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A5P35504 534 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 SETMARQ53H47 684 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 CLEC6AQ6EIG7 209 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PAOXQ6QHF9 649 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 OR8H1Q8NGG4 311 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UROC1Q96N76 676 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 NUSAP1Q9BXS6 441 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A7Q9HAW7 530 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A10Q9HAW8 530 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UGT1A8Q9HAW9 530 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 TBCCD1Q9NVR7 557 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 DNAJB9Q9UBS3 223 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 AP2A2O94973 939 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 ASLP04424 464 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 UNGP13051 313 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 HTR7P34969 479 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF157P51786 506 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 NRG1Q02297 640 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 CXCL9Q07325 125 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 GRIK5Q16478 980 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 GPR158Q5T848 1215 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 IL23RQ5VWK5 629 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 DEF8Q6ZN54 512 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 METTL3Q86U44 580 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 FSTL5Q8N475 847 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 OR4A15Q8NGL6 344 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 IPCEF1Q8WWN9 437 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 BPIFA1Q9NP55 256 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 NFKBIL1Q9UBC1 381 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PTBP2Q9UKA9 531 aaKnown RBP10.98□□□□□ -0.65
PBRM1-201ENST00000296302 TCAF1Q9Y4C2 921 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PCDHB1Q9Y5F3 818 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PREX1Q8TCU6 1659 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 FAM47E-STBD1D6RA91 191 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 TNFRSF11BO00300 401 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 SLC30A4O14863 429 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 ADAMDEC1O15204 470 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 NOS1APO75052 506 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-201ENST00000296302 MT-ND1P03886 318 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PGRP06401 933 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 CD48P09326 243 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PIRTP0C851 137 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 CSH1P0DML2 217 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 CSH2P0DML3 217 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 AOC1P19801 751 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PLD1Q13393 1074 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
PBRM1-201ENST00000296302 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 FAM35AQ86V20 835 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PDSS2Q86YH6 399 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 POMGNT2Q8NAT1 580 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 SLC35B2Q8TB61 432 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 DCAKDQ8WVC6 231 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PPCDCQ96CD2 204 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 MFSD3Q96ES6 412 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 FCRL2Q96LA5 508 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-201ENST00000296302 TSSK3Q96PN8 268 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 EHD1Q9H4M9 534 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 PREBQ9HCU5 417 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF490Q9ULM2 529 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-201ENST00000296302 CNOT6Q9ULM6 557 aaKnown RBP10.97□□□□□ -0.65
PBRM1-201ENST00000296302 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
PBRM1-201ENST00000296302 H0YGN5 161 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms