RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TRNAU1APQ9NX07 287 aaKnown RBP9.24□□□□□ -0.93
CNOT9-202ENST00000295701 DONSONQ9NYP3 566 aa9.24□□□□□ -0.93
CNOT9-202ENST00000295701 AKAP7Q9P0M2 348 aaPredicted RBP9.24□□□□□ -0.93
CNOT9-202ENST00000295701 MYO1AQ9UBC5 1043 aa9.24□□□□□ -0.93
CNOT9-202ENST00000295701 SLC17A4Q9Y2C5 497 aa9.24□□□□□ -0.93
CNOT9-202ENST00000295701 PRKAB1Q9Y478 270 aa9.24□□□□□ -0.93
CNOT9-202ENST00000295701 LOC101059948A0A1B0GTJ6 334 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 LRRC10BA6NIK2 292 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 HGSO14964 777 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PRPSAP2O60256 369 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 RAD1O60671 282 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 SOCS5O75159 536 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 RNF8O76064 485 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PGLSO95336 258 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 FTLP02792 175 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PRKAR1AP10644 381 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 THRAP10827 490 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 SFTPCP11686 197 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 ATP1A3P13637 1013 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 FERP16591 822 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 CDK11BP21127 795 aaKnown RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 CSTF2P33240 577 aaKnown RBP eCLIP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 GPR3P46089 330 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 GPR1P46091 355 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 POLE2P56282 527 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 BIRC2Q13490 618 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 ZNF235Q14590 738 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 NCAPHQ15003 741 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PYCR3Q53H96 274 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 OXLD1Q5BKU9 147 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 BORAQ6PGQ7 559 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 TIPARPQ7Z3E1 657 aaKnown RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 ZNF571Q7Z3V5 609 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 POLNQ7Z5Q5 900 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 NRSN1Q8IZ57 195 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 UNC5BQ8IZJ1 945 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 CACNA2D3Q8IZS8 1091 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 OR4D9Q8NGE8 314 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 HSPH1Q92598 858 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 SCRN2Q96FV2 425 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 SCARF2Q96GP6 870 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 OR2M4Q96R27 311 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 MGME1Q9BQP7 344 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 SPRY4Q9C004 299 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 B3GNT4Q9C0J1 378 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 CDH19Q9H159 772 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 EPN3Q9H201 632 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 APMAPQ9HDC9 416 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 NT5MQ9NPB1 228 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 ZNF71Q9NQZ8 489 aaPredicted RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 KCNK4Q9NYG8 393 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 CNOT8Q9UFF9 292 aaKnown RBP9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PHTF1Q9UMS5 762 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 PCDHGA3Q9Y5H0 932 aa9.23□□□□□ -0.93
CNOT9-202ENST00000295701 EIF3CLB5ME19 914 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.934e-11■■■□□ 17.4
CNOT9-202ENST00000295701 INPP4BO15327 924 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 MAP3K6O95382 1288 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 CYP2A6P11509 494 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 SKILP12757 684 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 DESP17661 470 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 HCAR3P49019 387 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 PPM1FP49593 454 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 KCNAB2Q13303 367 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 SQSTM1Q13501 440 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 TRA2AQ13595 282 aaKnown RBP eCLIP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 ATP1A1-AS1Q5TC04 95 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 LRRC66Q68CR7 880 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 TMEM71Q6P5X7 295 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 ZNF564Q8TBZ8 553 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 SLC37A2Q8TED4 501 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 AP2M1Q96CW1 435 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 RTP4Q96DX8 246 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 ZNF599Q96NL3 588 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 MCCC1Q96RQ3 725 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 EIF3CQ99613 913 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 HAUS4Q9H6D7 363 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 ZWILCHQ9H900 591 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 PILRAQ9UKJ1 303 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 PPIL1Q9Y3C6 166 aa9.22□□□□□ -0.93
CNOT9-202ENST00000295701 OAS3Q9Y6K5 1087 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 TNRC6AQ8NDV7 1962 aaKnown RBP9.22□□□□□ -0.93
CNOT9-202ENST00000295701 LRRC53A6NM62 1247 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 B4E171 279 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 H3BRJ5 948 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 PSMD11O00231 422 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 ASMTLO95671 621 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 ATP1A1P05023 1023 aaKnown RBP9.21□□□□□ -0.94
CNOT9-202ENST00000295701 RARAP10276 462 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 TEAD1P28347 426 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 OAS2P29728 719 aaKnown RBP9.21□□□□□ -0.94
CNOT9-202ENST00000295701 TSPAN7P41732 249 aa9.21□□□□□ -0.94
CNOT9-202ENST00000295701 MMP13P45452 471 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms