RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 SLC18A1P54219 525 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ITCHQ96J02 903 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PWWP2AQ96N64 755 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 DMAC2Q9NW81 257 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TXNDC11Q6PKC3 985 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ZNF354BQ96LW1 612 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CCSER2Q9H7U1 834 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 RBM7Q9Y580 266 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CXCL11O14625 94 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MAGEB3O15480 346 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TSPAN3O60637 253 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 SERPINA3P01011 423 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 OR1E1P30953 314 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 FAM98AQ8NCA5 519 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 S100PBPQ96BU1 408 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 FAM126AQ9BYI3 521 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MAP10Q9P2G4 905 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TRIM17Q9Y577 477 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MATN2O00339 956 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TOP3BO95985 862 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PTPN3P26045 913 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PLD1Q13393 1074 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 OR52K1Q8NGK4 314 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TSEN15Q8WW01 171 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TNKS2Q9H2K2 1166 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 SNX15Q9NRS6 342 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 LRATO95237 230 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 RPL3P39023 403 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 NOMO1Q15155 1222 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CA9Q16790 459 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 AHSA2Q719I0 299 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 COLGALT2Q8IYK4 626 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 LSM14AQ8ND56 463 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 GPR156Q8NFN8 814 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 RCN3Q96D15 328 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 C1GALT1C1Q96EU7 318 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 OSBPL7Q9BZF2 842 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CDH19Q9H159 772 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 IFT46Q9NQC8 304 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 RAP2CQ9Y3L5 183 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 COL1A2P08123 1366 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MIA3Q5JRA6 1907 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 KCNK1O00180 336 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 SERPINB7O75635 380 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TIPRLO75663 272 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PSMA1P25786 263 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 THPOP40225 353 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CDK9P50750 372 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ABHD15Q6UXT9 468 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ANKRD52Q8NB46 1076 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 HSFY1Q96LI6 401 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 LMAN2LQ9H0V9 348 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ARL8BQ9NVJ2 186 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PLIN3O60664 434 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 SLC25A12O75746 678 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 B3GAT3O94766 335 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 CCNB1P14635 433 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 NOS2P35228 1153 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 HNF4AP41235 474 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 DEFA5Q01523 94 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 E2F2Q14209 437 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 AP5B1Q2VPB7 878 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 LRRC69Q6ZNQ3 347 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PRR23BQ6ZRT6 265 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 SELENOMQ8WWX9 145 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ZNF350Q9GZX5 532 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MAT2BQ9NZL9 334 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 ANKDD1BA6NHY2 528 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 AXIN1O15169 862 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 FANCGO15287 622 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 MAGEC1O60732 1142 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 DOK6Q6PKX4 331 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 GPRIN3Q6ZVF9 776 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 PIK3R3Q92569 461 aa9.83□□□□□ -0.84
COL6A3-201ENST00000295550 DNAJC1Q96KC8 554 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 TLR8Q9NR97 1041 aaKnown RBP9.83□□□□□ -0.84
COL6A3-201ENST00000295550 FAM186AA6NE01 2351 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 SLC12A8A0AV02 714 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 PIK3R6Q5UE93 754 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 AFTPHQ6ULP2 937 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 XYLT1Q86Y38 959 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 TBC1D21Q8IYX1 336 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 PANX3Q96QZ0 392 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 MED11Q9P086 117 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 ATRNL1Q5VV63 1379 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 A0A1W2PPM1 405 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 TM7SF2O76062 418 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 APOL3O95236 402 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 NR2F1P10589 423 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 ZNF433Q8N7K0 673 aaPredicted RBP9.82□□□□□ -0.84
COL6A3-201ENST00000295550 EDEM1Q92611 657 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 OR52E6Q96RD3 313 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 SLC39A8Q9C0K1 460 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 ADARB2Q9NS39 739 aaKnown RBP9.82□□□□□ -0.84
COL6A3-201ENST00000295550 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 APC2O95996 2303 aa9.82□□□□□ -0.84
COL6A3-201ENST00000295550 METTL21EPA6NDL7 271 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms