RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ZNF641Q96N77 438 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 TRMOQ9BU70 441 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 NUF2Q9BZD4 464 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 SHCBP1LQ9BZQ2 653 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 GTSE1Q9NYZ3 720 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 FKBPLQ9UIM3 349 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ZNF711Q9Y462 761 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 WNT6Q9Y6F9 365 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 A0A0J9YYE9 177 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 TSPAN11A1L157 253 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 DCXO43602 365 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 MAGEC1O60732 1142 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 TRBC1P01850 177 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 PRSS56P0CW18 603 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 CD1DP15813 335 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ADARP55265 1226 aaKnown RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 GALNT1Q10472 559 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 PEX6Q13608 980 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 SH2D4BQ5SQS7 431 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 RAB44Q7Z6P3 723 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 CAMK1DQ8IU85 385 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 RHEBL1Q8TAI7 183 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 SMARCD2Q92925 531 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.1□□□□□ -0.95
PDPN-201ENST00000294489 SMIM14Q96QK8 99 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 MCCC1Q96RQ3 725 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 ATP13A3Q9H7F0 1226 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 BPIFA1Q9NP55 256 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 EVLQ9UI08 416 aaPredicted RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 SLC25A13Q9UJS0 675 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 ERVW-1Q9UQF0 538 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 FNDC3AQ9Y2H6 1198 aaKnown RBP9.1□□□□□ -0.95
PDPN-201ENST00000294489 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
PDPN-201ENST00000294489 GOLGA8QA0A0J9YX86 632 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 GOLGA8OA6NCC3 632 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CAPN8A6NHC0 703 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 GOLGA8NF8WBI6 632 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 NEMP1O14524 444 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 GRID2O43424 1007 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ZBTB14O43829 449 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 VPS26AO75436 327 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 SRPRAP08240 638 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 IMPDH1P20839 514 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 FSHRP23945 695 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 STK19P49842 368 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 RAD51Q06609 339 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CBX2Q14781 532 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 ZRSR2Q15696 482 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 PDCD2Q16342 344 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 PTPRNQ16849 979 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CARD16Q5EG05 197 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ZSWIM9Q86XI8 627 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CBARPQ8N350 705 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 WFIKKN2Q8TEU8 576 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ASIC4Q96FT7 647 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 OR52B2Q96RD2 323 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CCDC28BQ9BUN5 200 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 TFB2MQ9H5Q4 396 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 DENND2DQ9H6A0 471 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 WDR55Q9H6Y2 383 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 PIDD1Q9HB75 910 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 DUS2Q9NX74 493 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 FAM50BQ9Y247 325 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 A0A1W2PQ67 120 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 GAPDHSO14556 408 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 PKMP14618 531 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 HNRNPLP14866 589 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDPN-201ENST00000294489 KCNA5P22460 613 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 EPHA3P29320 983 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PRDX6P30041 224 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PPARGP37231 505 aaPredicted RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 PTPN5P54829 565 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ATP6V0D1P61421 351 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 NFKB2Q00653 900 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 HYAL1Q12794 435 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 LSM12Q3MHD2 195 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 C6orf163Q5TEZ5 329 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 NXNQ6DKJ4 435 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ANKRD54Q6NXT1 300 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 TMC5Q6UXY8 1006 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 STK40Q8N2I9 435 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 NKAPQ8N5F7 415 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 KDM1BQ8NB78 822 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 OR6K2Q8NGY2 324 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 HCAR2Q8TDS4 363 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 FAM136AQ96C01 138 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ABHD8Q96I13 439 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 PPP1R36Q96LQ0 422 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 FAM83CQ9BQN1 747 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CERS4Q9HA82 394 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 COMMD10Q9Y6G5 202 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 COL4A2P08572 1712 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 SUPT7LO94864 414 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 POP4O95707 220 aaKnown RBP9.09□□□□□ -0.95
PDPN-201ENST00000294489 ASLP04424 464 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 ADH5P11766 374 aa9.09□□□□□ -0.95
PDPN-201ENST00000294489 CTPS1P17812 591 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms