RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 NEU3Q9UQ49 428 aa18.59■□□□□ 0.57
SSC4D-201ENST00000275560 PDCD11Q14690 1871 aaKnown RBP18.58■□□□□ 0.57
SSC4D-201ENST00000275560 AP3B1O00203 1094 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 CNTN5O94779 1100 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 C1RP00736 705 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 AGXTP21549 392 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 EEF1DP29692 281 aaKnown RBP18.58■□□□□ 0.57
SSC4D-201ENST00000275560 CLCN5P51795 746 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 LSM3P62310 102 aaKnown RBP18.58■□□□□ 0.57
SSC4D-201ENST00000275560 ITKQ08881 620 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 IHHQ14623 411 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 CILP2Q8IUL8 1156 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 PDPRQ8NCN5 879 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 TMBIM1Q969X1 311 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 MAF1Q9H063 256 aa18.58■□□□□ 0.57
SSC4D-201ENST00000275560 ZNF236Q9UL36 1845 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 DNAJC25-GNG10A0A024R161 153 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 A8MU76 341 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 PSMD3O43242 534 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 MSI1O43347 362 aaKnown RBP18.58■□□□□ 0.56
SSC4D-201ENST00000275560 BCAS1O75363 584 aaPredicted RBP18.58■□□□□ 0.56
SSC4D-201ENST00000275560 LBPP18428 481 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 HTR1BP28222 390 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 HPCAL1P37235 193 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 ARSFP54793 590 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 GEMP55040 296 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 GALNT1Q10472 559 aaPredicted RBP18.58■□□□□ 0.56
SSC4D-201ENST00000275560 LAPTM5Q13571 262 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 SELPLGQ14242 412 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 NOTUMQ6P988 496 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 SPARTQ8N0X7 666 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 CADM3Q8N126 398 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.58■□□□□ 0.56
SSC4D-201ENST00000275560 ESAMQ96AP7 390 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 TSGA13Q96PP4 275 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 IL12RB2Q99665 862 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 POLE4Q9NR33 117 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 RGS18Q9NS28 235 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 UTS2RQ9UKP6 389 aa18.58■□□□□ 0.56
SSC4D-201ENST00000275560 FNDC1Q4ZHG4 1894 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 NCF1BA6NI72 391 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 NCF1CA8MVU1 366 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 GJB3O75712 270 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 ESRRBO95718 433 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 CD4P01730 458 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PRSS56P0CW18 603 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 FCGR1AP12314 374 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 NCF1P14598 390 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 DPY19L1Q2PZI1 675 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PGS1Q32NB8 556 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 SV2CQ496J9 727 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PM20D1Q6GTS8 502 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 CRTC3Q6UUV7 619 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TBC1D21Q8IYX1 336 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 SLC7A5P1Q8MH63 180 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 FAM86B1Q8N7N1 296 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 SH3YL1Q96HL8 342 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 KLHL5Q96PQ7 755 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 ACOX2Q99424 681 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TUBA1CQ9BQE3 449 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 CCDC68Q9H2F9 335 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 ENTPD7Q9NQZ7 604 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TSC22D4Q9Y3Q8 395 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 FAM32AQ9Y421 112 aaKnown RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PCDHGA8Q9Y5G5 932 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TTC3P53804 2025 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 MEIS3P2A8K0S8 358 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PTGES3LE9PB15 166 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 UPK1AO00322 258 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 MOCS2O96007 188 aaPredicted RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 FSHRP23945 695 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 CRHBPP24387 322 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 CCNCP24863 283 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 PIGAP37287 484 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 ZFP36L2P47974 494 aaKnown RBP18.57■□□□□ 0.56
SSC4D-201ENST00000275560 FPGSQ05932 587 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 SLC2A7Q6PXP3 512 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 RAB2BQ8WUD1 216 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 HPS1Q92902 700 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TRMOQ9BU70 441 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 TOR3AQ9H497 397 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 ELP3Q9H9T3 547 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 GPR45Q9Y5Y3 372 aa18.57■□□□□ 0.56
SSC4D-201ENST00000275560 NYNRINQ9P2P1 1898 aaKnown RBP18.56■□□□□ 0.56
SSC4D-201ENST00000275560 INMTO95050 263 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 S1PR4O95977 384 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 MTHFD2P13995 350 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 CD1DP15813 335 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 WARSP23381 471 aaKnown RBP18.56■□□□□ 0.56
SSC4D-201ENST00000275560 DNAJB2P25686 324 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
SSC4D-201ENST00000275560 AIF1P55008 147 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 MTPNP58546 118 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 RAB15P59190 212 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 ZNF549Q6P9A3 640 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 SLC16A12Q6ZSM3 486 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 DSG4Q86SJ6 1040 aa18.56■□□□□ 0.56
SSC4D-201ENST00000275560 ZFP90Q8TF47 636 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms