RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 HSD17B1P14061 328 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 LBPP18428 481 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 SCNN1AP37088 669 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 HPCAL1P37235 193 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CD86P42081 329 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CLCQ05315 142 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 GLYATQ6IB77 296 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 MINDY1Q8N5J2 469 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TBATAQ96M53 351 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC68Q9H2F9 335 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PRDM8Q9NQV8 689 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 TREX1Q9NSU2 369 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 ABCD2Q9UBJ2 740 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
COL8A1-202ENST00000273342 UBA6A0AVT1 1052 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 ASPDHA6ND91 283 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 XPNPEP2O43895 674 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 C1RP00736 705 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 HTR1BP28222 390 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 CCR1P32246 355 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 GGT5P36269 586 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 RPL34P49207 117 aaKnown RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 HERVK_113P63132 956 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 IFITM3Q01628 133 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 BNIP2Q12982 314 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SELPLGQ14242 412 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 KYAT1Q16773 422 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 TMEM236Q5W0B7 351 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 DNAJC14Q6Y2X3 702 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC81Q6ZN84 652 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SLCO6A1Q86UG4 719 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SLC22A9Q8IVM8 553 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SCAMP5Q8TAC9 235 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SLC22A17Q8WUG5 538 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 TMEM40Q8WWA1 233 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 FIG4Q92562 907 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 NRBF2Q96F24 287 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 ERVK-6Q9BXR3 956 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 BAG5Q9UL15 447 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PNMA8BQ9ULN7 279 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 INVSQ9Y283 1065 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 MAFKO60675 156 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 HRH2P25021 359 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PIGAP37287 484 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 AGTR2P50052 363 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 ARSFP54793 590 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 OCA2Q04671 838 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 LAPTM4AQ15012 233 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 DCP1BQ8IZD4 617 aaKnown RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SPARTQ8N0X7 666 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 SH3YL1Q96HL8 342 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-202ENST00000273342 UBXN10Q96LJ8 280 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 MIR1-1HGQ9H1L0 117 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 POU2F3Q9UKI9 436 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PCDHGA11Q9Y5H2 935 aa12.85□□□□□ -0.35
COL8A1-202ENST00000273342 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 TCRBV5S2A0A599 114 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 GNGT2O14610 69 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 GPIP06744 558 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 TGFBR1P36897 503 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 DGKQP52824 942 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 DCAF4L1Q3SXM0 396 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 BLOC1S3Q6QNY0 202 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 ARHGAP12Q8IWW6 846 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 CASP10Q92851 521 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NSMCE2Q96MF7 247 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 ZNF560Q96MR9 790 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 TBCDQ9BTW9 1192 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 BDH2Q9BUT1 245 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
COL8A1-202ENST00000273342 CNOT3O75175 753 aaKnown RBP12.84□□□□□ -0.35
COL8A1-202ENST00000273342 MTHFRP42898 656 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 PGFP49763 221 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 GEMP55040 296 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
COL8A1-202ENST00000273342 DSC2Q02487 901 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 CILP2Q8IUL8 1156 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 TBC1D21Q8IYX1 336 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 BLOC1S5Q8TDH9 187 aa12.84□□□□□ -0.35
COL8A1-202ENST00000273342 HASPINQ8TF76 798 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms