RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TM7SF3Q9NS93 570 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 NLE1Q9NVX2 485 aaPredicted RBP12.67□□□□□ -0.38
SS18-202ENST00000269138 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 TCAF1Q9Y4C2 921 aa12.67□□□□□ -0.38
SS18-202ENST00000269138 HEATR9A2RTY3 570 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 EFCAB8A8MWE9 144 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 TP73O15350 636 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PPFIA2O75334 1257 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 MTX2O75431 263 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PYGLP06737 847 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 CD59P13987 128 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 JUNDP17535 347 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PSMA3P25788 255 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 CCT8P50990 548 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 ITGA8P53708 1063 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 PDE1BQ01064 536 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PPARDQ03181 441 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 KHDC1Q4VXA5 237 aaKnown RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 PCID2Q5JVF3 399 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 TSTD2Q5T7W7 516 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 ZDHHC20Q5W0Z9 365 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 CES3Q6UWW8 571 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 KANSL1Q7Z3B3 1105 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 MAATS1Q7Z4T9 603 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PHACTR4Q8IZ21 702 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
SS18-202ENST00000269138 NOA1Q8NC60 698 aaKnown RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 ZNF398Q8TD17 642 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 SAP25Q8TEE9 199 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 BTN2A2Q8WVV5 523 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 GLYATL1Q969I3 302 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 CDKN2AIPNLQ96HQ2 116 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 TBATAQ96M53 351 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PWWP2AQ96N64 755 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 DPH5Q9H2P9 285 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 CYP4F12Q9HCS2 524 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 BFARQ9NZS9 450 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 KLQ9UEF7 1012 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 MOSPD1Q9UJG1 213 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 PCYT1BQ9Y5K3 369 aaPredicted RBP12.66□□□□□ -0.38
SS18-202ENST00000269138 TMEM131Q92545 1883 aa12.66□□□□□ -0.38
SS18-202ENST00000269138 MYLKQ15746 1914 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 SCN8AQ9UQD0 1980 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 CCDC162PA2VCL2 907 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 OR51F1A6NGY5 319 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 TNFRSF10CO14798 259 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 DFNA5O60443 496 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 PIAS2O75928 621 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 SEC31AO94979 1220 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 SLC25A14O95258 325 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 ASMTLO95671 621 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 CELA2BP08218 269 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 PRSS56P0CW18 603 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 MLNP12872 115 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 KELP23276 732 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 NMBRP28336 390 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 CDKN1CP49918 316 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 LIMK1P53667 647 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 ARHGAP8P85298 464 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 C1orf61Q13536 156 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 RSPO4Q2I0M5 234 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 PDPK2PQ6A1A2 396 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 HIBCHQ6NVY1 386 aaPredicted RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 OXR1Q8N573 874 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 PPHLN1Q8NEY8 458 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 OR13J1Q8NGT2 312 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 DTX3LQ8TDB6 740 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 NETO1Q8TDF5 533 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 SNF8Q96H20 258 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 TRIM56Q9BRZ2 755 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 IL22Q9GZX6 179 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
SS18-202ENST00000269138 SLC17A4Q9Y2C5 497 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 BTBD3Q9Y2F9 522 aa12.65□□□□□ -0.38
SS18-202ENST00000269138 PRSS38A1L453 326 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 ESPNB1AK53 854 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 AP3B1O00203 1094 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 BANF1O75531 89 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 RASGRP1O95267 797 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 DGKAP23743 735 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 MC4RP32245 332 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 HADHAP40939 763 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 MAGEA3P43357 314 aa12.64□□□□□ -0.39
SS18-202ENST00000269138 HK3P52790 923 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms