RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ESR1P03372 595 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SBK3P0C264 359 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 KCNA4P22459 653 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 EIF2DP41214 584 aaKnown RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 ST8SIA6P61647 398 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 DLG1Q12959 904 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ZNF460Q14592 562 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 GPR33Q49SQ1 333 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SPDYAQ5MJ70 313 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 IER5LQ5T953 404 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SNX20Q7Z614 316 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 C12orf40Q86WS4 652 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PIANPQ8IYJ0 282 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CPA6Q8N4T0 437 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PAF1Q8N7H5 531 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 FLCNQ8NFG4 579 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 HEXDCQ8WVB3 486 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 NXNL1Q96CM4 212 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CCDC126Q96EE4 140 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 FAM96AQ9H5X1 160 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SYTL2Q9HCH5 934 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ELOVL2Q9NXB9 296 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TAS2R13Q9NYV9 303 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CRYL1Q9Y2S2 319 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 WASF2Q9Y6W5 498 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 BPTFQ12830 3046 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 COL4A3Q01955 1670 aa15.27■□□□□ 0.04
COPS3-201ENST00000268717 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 SRP72O76094 671 aaKnown RBP15.27■□□□□ 0.03
COPS3-201ENST00000268717 SLC4A1P02730 911 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 UGT2B4P06133 528 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 PYGLP06737 847 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 ZNF30P17039 623 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 ITGALP20701 1170 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 RPS3P23396 243 aaKnown RBP eCLIP15.27■□□□□ 0.03
COPS3-201ENST00000268717 SERPINB5P36952 375 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 SPAM1P38567 509 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 DNAJB13P59910 316 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 TIAL1Q01085 375 aaKnown RBP eCLIP15.27■□□□□ 0.03
COPS3-201ENST00000268717 PTPRRQ15256 657 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 PREPLQ4J6C6 727 aaPredicted RBP15.27■□□□□ 0.03
COPS3-201ENST00000268717 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 TECRLQ5HYJ1 363 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 CES4AQ5XG92 561 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 PSAPL1Q6NUJ1 521 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 CRTC1Q6UUV9 634 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 DTX3LQ8TDB6 740 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 KCNJ9Q92806 393 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 SCYL1Q96KG9 808 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 CIPCQ9C0C6 399 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 KCNH6Q9H252 994 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 EBF3Q9H4W6 596 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 STN1Q9H668 368 aaKnown RBP15.27■□□□□ 0.03
COPS3-201ENST00000268717 BRD9Q9H8M2 597 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 NPHS2Q9NP85 383 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 HPS4Q9NQG7 708 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 KCNK4Q9NYG8 393 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 PCDHB1Q9Y5F3 818 aa15.27■□□□□ 0.03
COPS3-201ENST00000268717 NPIPB15A6NHN6 443 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 AGAP14A8MT82 685 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 TK2O00142 265 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 GAPDHSO14556 408 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 CLDN7O95471 211 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 CCDC166P0CW27 439 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 CYP2A6P11509 494 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 PKMP14618 531 aaKnown RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 ZNF37AP17032 561 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 AOC1P19801 751 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 GMPRP36959 345 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 SLC1A6P48664 564 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 STARD6P59095 220 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 ABCE1P61221 599 aaKnown RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 ITGA9Q13797 1035 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 CSHL1Q14406 222 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 MLF2Q15773 248 aaPredicted RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 SLC44A4Q53GD3 710 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 RAVER1Q8IY67 606 aaKnown RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 TMEM105Q8N8V8 129 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 CHST14Q8NCH0 376 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 PPP4R1Q8TF05 950 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 CYB5D2Q8WUJ1 264 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 DNASE1L2Q92874 299 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 BIRC8Q96P09 236 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 PLEKHG4BQ96PX9 1271 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 TBC1D17Q9HA65 648 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 IL36AQ9UHA7 158 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 PLA2G4CQ9UP65 541 aa15.26■□□□□ 0.03
COPS3-201ENST00000268717 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
COPS3-201ENST00000268717 GLYATL1P3A0A0U1RQE8 302 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 UBA6A0AVT1 1052 aaPredicted RBP15.25■□□□□ 0.03
COPS3-201ENST00000268717 TTC34A8MYJ7 566 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PRAMEF1O95521 474 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 PRSS56P0CW18 603 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 BPIP17213 487 aa15.25■□□□□ 0.03
COPS3-201ENST00000268717 ATP5F1P24539 256 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms