RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TSC2P49815 1807 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 M0QZ92 97 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 PSMD3O43242 534 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 TCF3P15923 654 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 ZNF37AP17032 561 aaPredicted RBP16.71■□□□□ 0.27
SQLE-201ENST00000265896 NFKBIAP25963 317 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 OR1E1P30953 314 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 PBX3P40426 434 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
SQLE-201ENST00000265896 ARTNQ5T4W7 220 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 MILR1Q7Z6M3 343 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 ZC3H7AQ8IWR0 971 aaKnown RBP16.71■□□□□ 0.27
SQLE-201ENST00000265896 FBXO39Q8N4B4 442 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 SIDT2Q8NBJ9 832 aaKnown RBP16.71■□□□□ 0.27
SQLE-201ENST00000265896 NSMCE3Q96MG7 304 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 PLEKHG4BQ96PX9 1271 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 AP5M1Q9H0R1 490 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 SLC8A2Q9UPR5 921 aa16.71■□□□□ 0.27
SQLE-201ENST00000265896 C1RP00736 705 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 IL12AP29459 219 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 RENBPP51606 427 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 FOXD4Q12950 439 aaPredicted RBP16.71■□□□□ 0.26
SQLE-201ENST00000265896 INPP5AQ14642 412 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 FSCN1Q16658 493 aaKnown RBP16.71■□□□□ 0.26
SQLE-201ENST00000265896 MS4A13Q5J8X5 152 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 LYSMD3Q7Z3D4 306 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 ZNF280BQ86YH2 543 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 ABI1Q8IZP0 508 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 FNDC5Q8NAU1 212 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 FBXO30Q8TB52 745 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 TSPAN17Q96FV3 270 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 NPLQ9BXD5 320 aaPredicted RBP16.71■□□□□ 0.26
SQLE-201ENST00000265896 DGCR6LQ9BY27 220 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 AGPAT4Q9NRZ5 378 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 ABCC13Q9NSE7 274 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 ZNF225Q9UK10 706 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 SPO11Q9Y5K1 396 aa16.71■□□□□ 0.26
SQLE-201ENST00000265896 VCANP13611 3396 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 H3BMQ9 156 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 ECI2O75521 394 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 RSL1D1O76021 490 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 OR4F21O95013 312 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 PRKACGP22612 351 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 RGRP47804 291 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 HTR6P50406 440 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 FAM45BPQ6NSW5 357 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 TRIM74Q86UV6 250 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TRIM73Q86UV7 250 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 GPR180Q86V85 440 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 SLC22A9Q8IVM8 553 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 OR7D4Q8NG98 312 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 OR4K2Q8NGD2 314 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 FAM45AQ8TCE6 357 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CALML6Q8TD86 181 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 FAR2Q96K12 515 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 COG8Q96MW5 612 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CSNK1G1Q9HCP0 422 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 PDCD11Q14690 1871 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 A8MX80 341 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TOR1BO14657 336 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 ACOX3O15254 700 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 GUCA1CO95843 209 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CNPP09543 421 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 ATXN1LP0C7T5 689 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 BMP2P12643 396 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 LBPP18428 481 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TBX4P57082 545 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 SEMG2Q02383 582 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CD300CQ08708 224 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TRAP1Q12931 704 aaKnown RBP16.7■□□□□ 0.26
SQLE-201ENST00000265896 USP41Q3LFD5 358 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 SYVN1Q86TM6 617 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 STK32CQ86UX6 486 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 TMEM86AQ8N2M4 240 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 ADAM2Q99965 735 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 CHID1Q9BWS9 393 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 SMURF2Q9HAU4 748 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 PADI3Q9ULW8 664 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 PCDHGC4Q9Y5F7 938 aa16.7■□□□□ 0.26
SQLE-201ENST00000265896 MOXD2PA6NHM9 499 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 ATP6V1G1O75348 118 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 MATN1P21941 496 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 KCNK10P57789 538 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 LSM3P62310 102 aaKnown RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 IL1RL1Q01638 556 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 PHYKPLQ8IUZ5 450 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 DHRSXQ8N5I4 330 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 ANKFN1Q8N957 763 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 CLHC1Q8NHS4 586 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
SQLE-201ENST00000265896 PRKD2Q9BZL6 878 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 FANCEQ9HB96 536 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 PCDH12Q9NPG4 1184 aa16.69■□□□□ 0.26
SQLE-201ENST00000265896 TIMMDC1Q9NPL8 285 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms