RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ZNF45Q02386 682 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 ZNF621Q6ZSS3 439 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 UNC93AQ86WB7 457 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLC15A4Q8N697 577 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SPOCK2Q92563 424 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 TTYH2Q9BSA4 534 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLC39A8Q9C0K1 460 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SENP6Q9GZR1 1112 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 POMKQ9H5K3 350 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 PIF1Q9H611 641 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 UFSP2Q9NUQ7 469 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 NOX1Q9Y5S8 564 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 DOCK11Q5JSL3 2073 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 HOXA2O43364 376 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 SLC15A1P46059 708 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 LINC00116Q8NCU8 138 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 OR2T34Q8NGX1 318 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 OR2T3Q8NH03 318 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 CDCA5Q96FF9 252 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 FAM163AQ96GL9 167 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 HOPXQ9BPY8 73 aaPredicted RBP5.69□□□□□ -1.5
VCAN-201ENST00000265077 NTN4Q9HB63 628 aa5.69□□□□□ -1.5
VCAN-201ENST00000265077 UMPSP11172 480 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TNNI3P19429 210 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TIE1P35590 1138 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PFKFB4Q16877 469 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SPRED3Q2MJR0 410 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MOSPD2Q8NHP6 518 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MYLPFQ96A32 169 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TM9SF2Q99805 663 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MYOFQ9NZM1 2061 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 ERVK-10P10266 1014 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PPIBP23284 216 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 LIN54Q6MZP7 749 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CADM2Q8N3J6 435 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CBR4Q8N4T8 237 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CD101Q93033 1021 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CDADC1Q9BWV3 514 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PRMT8Q9NR22 394 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 POMPQ9Y244 141 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 A8MV72 311 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 FOXN2P32314 431 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ERVK-8P63133 956 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ARHGAP15Q53QZ3 475 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CNSTQ6PJW8 725 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 C10orf53Q8N6V4 93 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 OR5J2Q8NH18 312 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TMEM39BQ9GZU3 492 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 BRD9Q9H8M2 597 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MCUBQ9NWR8 336 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 NFKBIL1Q9UBC1 381 aaPredicted RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 UBQLN2Q9UHD9 624 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MAGEL2Q9UJ55 1249 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 RAP2CQ9Y3L5 183 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SNAPC5O75971 98 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CXCL8P10145 99 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 DARSP14868 501 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 NOS3P29474 1203 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 IL27RAQ6UWB1 636 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLC51BQ86UW2 128 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PEX13Q92968 403 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MBOAT7Q96N66 472 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 FETUBQ9UGM5 382 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TBC1D30Q9Y2I9 924 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 AQP9O43315 295 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 NUDT7P0C024 238 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 HPGDP15428 266 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CD53P19397 219 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 AZGP1P25311 298 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 PBX1P40424 430 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 GTF2BQ00403 316 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 TOMM20Q15388 145 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PHF10Q8WUB8 498 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 TRNT1Q96Q11 434 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 APOL2Q9BQE5 337 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PORCNQ9H237 461 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 HPF1Q9NWY4 346 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 OPTCQ9UBM4 332 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 MAB21L2Q9Y586 359 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CACNA1SQ13698 1873 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 NFAT5O94916 1531 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 UBE2QL1A1L167 161 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLITRK3O94933 977 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CNPP09543 421 aaKnown RBP5.68□□□□□ -1.5
VCAN-201ENST00000265077 IL1R1P14778 569 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 CAP2P40123 477 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 GSTM5P46439 218 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 ARL4DP49703 201 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PLK1P53350 603 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SKP1P63208 163 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 SLC18A2Q05940 514 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 EFEMP1Q12805 493 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 Q3ZCU0 254 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 PCID2Q5JVF3 399 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 HECTD3Q5T447 861 aa5.68□□□□□ -1.5
VCAN-201ENST00000265077 GPRIN3Q6ZVF9 776 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms