RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GABARAPO95166 117 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 HTR1BP28222 390 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 CCNA1P78396 465 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 CDC20Q12834 499 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 EML3Q32P44 896 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 FUT11Q495W5 492 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 SV2CQ496J9 727 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 RABL3Q5HYI8 236 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 GLYATQ6IB77 296 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 TMEM214Q6NUQ4 689 aaKnown RBP12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 CATSPER4Q7RTX7 472 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 LACC1Q8IV20 430 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 SCML4Q8N228 414 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 CHDHQ8NE62 594 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 TSPAN18Q96SJ8 248 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 IL12RB2Q99665 862 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 DGCR6LQ9BY27 220 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 TOR3AQ9H497 397 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 SNTG2Q9NY99 539 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 FAM47E-STBD1D6RA91 191 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 G3V2T6 193 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PIRO00625 290 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 MSI1O43347 362 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC22A3O75751 556 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 MT-CYBP00156 380 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 VTNP04004 478 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CYBBP04839 570 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 TSPAN8P19075 237 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NFKBIAP25963 317 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 GRIK1P39086 918 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 IL18R1Q13478 541 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 KCTD2Q14681 263 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CTF1Q16619 201 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 ARMC8Q8IUR7 673 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 HID1Q8IV36 788 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PTGR2Q8N8N7 351 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 SMG8Q8ND04 991 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PHF10Q8WUB8 498 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 VTA1Q9NP79 307 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 TRPV5Q9NQA5 729 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 USE1Q9NZ43 259 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 DSEQ9UL01 958 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PCDHGB1Q9Y5G3 927 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 DOCK1Q14185 1865 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 A0A0G2JMZ2 1700 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 LRRC37A2A6NM11 1700 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 MATN3O15232 486 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CHEK2O96017 543 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 GSNP06396 782 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 ANXA6P08133 673 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NCAM1P13591 858 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CHRM3P20309 590 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CYP2C18P33260 490 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NDUFV1P49821 464 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 TAF6P49848 677 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CDH13P55290 713 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 TIGD7Q6NT04 549 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 ITFG1Q8TB96 612 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 ANKRD49Q8WVL7 239 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 C18orf25Q96B23 403 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 RBM4BQ9BQ04 359 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 RBM4Q9BWF3 364 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 NUSAP1Q9BXS6 441 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 CNGB3Q9NQW8 809 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 AIG1Q9NVV5 245 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 THG1LQ9NWX6 298 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 DNAJB9Q9UBS3 223 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 COL1A2P08123 1366 aa12.32□□□□□ -0.44
CHMP2B-201ENST00000263780 DFFAO00273 331 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC7A4O43246 635 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 LRIG2O94898 1065 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 NADKO95544 446 aaPredicted RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 POLR2JP52435 117 aaKnown RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 GPR158Q5T848 1215 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 LIMS2Q7Z4I7 341 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 MFSD4AQ8N468 514 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 RHEBL1Q8TAI7 183 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms