RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SCML1Q9UN30 329 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 SMG5Q9UPR3 1016 aaKnown RBP22.54■■□□□ 1.2
UFD1-201ENST00000263202 VPS9D1Q9Y2B5 631 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 COQ6Q9Y2Z9 468 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 KANSL1LA0AUZ9 987 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 WNT9AO14904 365 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 C6P13671 934 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 ZBTB16Q05516 673 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 FZD5Q13467 585 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 LRRC32Q14392 662 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 DBN1Q16643 649 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 ATP13A5Q4VNC0 1218 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 HENMT1Q5T8I9 393 aaKnown RBP22.54■■□□□ 1.2
UFD1-201ENST00000263202 UBALD2Q8IYN6 164 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 SIX5Q8N196 739 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 MDM1Q8TC05 714 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 CXorf40AQ8TE69 158 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 DTD2Q96FN9 168 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 SIPA1Q96FS4 1042 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 ABCG8Q9H221 673 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 CNOT10Q9H9A5 744 aaKnown RBP22.54■■□□□ 1.2
UFD1-201ENST00000263202 CRLS1Q9UJA2 301 aa22.54■■□□□ 1.2
UFD1-201ENST00000263202 UBA6A0AVT1 1052 aaPredicted RBP22.53■■□□□ 1.2
UFD1-201ENST00000263202 CHURC1-FNTBB4DL54 471 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 TSPAN6O43657 245 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 OR1I1O60431 355 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 SAT1P21673 171 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 ACRV1P26436 265 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 POU4F1Q01851 419 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 CREB5Q02930 508 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 ITGA9Q13797 1035 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 PDE1CQ14123 709 aaPredicted RBP22.53■■□□□ 1.2
UFD1-201ENST00000263202 UBXN2BQ14CS0 331 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 HECTD2Q5U5R9 776 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 LYPLAL1Q5VWZ2 237 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 CYP2U1Q7Z449 544 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 ATXN2LQ8WWM7 1075 aaKnown RBP22.53■■□□□ 1.2
UFD1-201ENST00000263202 APOPT1Q96IL0 206 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 SPATA16Q9BXB7 569 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 MKS1Q9NXB0 559 aa22.53■■□□□ 1.2
UFD1-201ENST00000263202 FAM47DPA6NHR8 397 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 NDUFV2P19404 249 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 PTGER3P43115 390 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 TAS2R39P59534 338 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 ZKSCAN8Q15776 578 aaPredicted RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 PPM1JQ5JR12 505 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 FAM45BPQ6NSW5 357 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 CEP97Q8IW35 865 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 NXPE1Q8N323 547 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 FAM45AQ8TCE6 357 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 GANCQ8TET4 914 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 TTC1Q99614 292 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 OLFM1Q99784 485 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 RIOK2Q9BVS4 552 aaKnown RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 SLC13A1Q9BZW2 595 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 FOXQ1Q9C009 403 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 VWA7Q9Y334 891 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 TCRBV21S2A2A0A5A6 115 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 COPEO14579 308 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 RECQL5O94762 991 aaPredicted RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 MPOP05164 745 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 FMO4P31512 558 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 RPA3P35244 121 aaPredicted RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 PPARGP37231 505 aaPredicted RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 PGGT1BP53609 377 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 SLC18A1P54219 525 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 ADARP55265 1226 aaKnown RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 TRAM1L1Q8N609 369 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 BIRC8Q96P09 236 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 AARSD1Q9BTE6 412 aaKnown RBP22.52■■□□□ 1.2
UFD1-201ENST00000263202 TMPRSS11EQ9UL52 423 aa22.52■■□□□ 1.2
UFD1-201ENST00000263202 A0A096LPK6 155 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 FAM170BA6NMN3 283 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 LZTS3O60299 673 aaPredicted RBP22.51■■□□□ 1.19
UFD1-201ENST00000263202 C2P06681 752 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 CHN1P15882 459 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 STMN1P16949 149 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 GABRG2P18507 467 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 CDKN2DP55273 166 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 RAB10P61026 200 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 TTC31Q49AM3 519 aaPredicted RBP22.51■■□□□ 1.19
UFD1-201ENST00000263202 CDHR3Q6ZTQ4 885 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 SYT13Q7L8C5 426 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 ANKRD42Q8N9B4 389 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 FLCNQ8NFG4 579 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 ULK4Q96C45 1275 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 AP2M1Q96CW1 435 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 CCDC97Q96F63 343 aaPredicted RBP22.51■■□□□ 1.19
UFD1-201ENST00000263202 CABS1Q96KC9 395 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 ASB2Q96Q27 587 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 NELL2Q99435 816 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 ZSCAN5AQ9BUG6 496 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 P2RY12Q9H244 342 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 VPS11Q9H270 941 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 TRPM6Q9BX84 2022 aa22.51■■□□□ 1.19
UFD1-201ENST00000263202 PHGDHO43175 533 aaKnown RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 PLRG1O43660 514 aaKnown RBP22.5■■□□□ 1.19
UFD1-201ENST00000263202 GMPRP36959 345 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 SLC12A2P55011 1212 aa22.5■■□□□ 1.19
UFD1-201ENST00000263202 ZNF284Q2VY69 593 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms