RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RGRP47804 291 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 EMP3P54852 163 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ARTNQ5T4W7 220 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 MANEALQ5VSG8 457 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 LZTR1Q8N653 840 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 FNDC5Q8NAU1 212 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 OR52B6Q8NGF0 335 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 OR4L1Q8NH43 312 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ARRDC2Q8TBH0 407 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 CCDC97Q96F63 343 aaPredicted RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 ZYG11BQ9C0D3 744 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 PAIP1Q9H074 479 aaKnown RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 CCDC68Q9H2F9 335 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ADNPQ9H2P0 1102 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 ALG2Q9H553 416 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 CATSPERZQ9NTU4 200 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 DNAAF2Q9NVR5 837 aaKnown RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 EIF2B4Q9UI10 523 aaKnown RBP9.08□□□□□ -0.96
MSH4-201ENST00000263187 TMCO1Q9UM00 188 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 FADS3Q9Y5Q0 445 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 TRPV2Q9Y5S1 764 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 THSD7BQ9C0I4 1608 aa9.08□□□□□ -0.96
MSH4-201ENST00000263187 NT5C1B-RDH14C9J2C7 533 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 J3QRK9 145 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 HAS3O00219 553 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 KCNH1O95259 989 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PARNO95453 639 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 GUCA1CO95843 209 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 LBPP18428 481 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 KCNK10P57789 538 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 OR4D2P58180 307 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 RPL26P61254 145 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 ESRRGP62508 458 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 SEMG2Q02383 582 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CREB5Q02930 508 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 BNIP3Q12983 259 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 MAP2K5Q13163 448 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 SELPLGQ14242 412 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 INPP5AQ14642 412 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PTPRNQ16849 979 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 BRMS1LQ5PSV4 323 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PPP4R4Q6NUP7 873 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 KIAA0408Q6ZU52 694 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CAMK1DQ8IU85 385 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PDZD8Q8NEN9 1154 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 OR2T11Q8NH01 316 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 FBXL8Q96CD0 374 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 NSMCE3Q96MG7 304 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CCSER2Q9H7U1 834 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CXorf21Q9HAI6 301 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CCM2LQ9NUG4 571 aaPredicted RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 NYNRINQ9P2P1 1898 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 ASPDHA6ND91 283 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 OR4F21O95013 312 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CNPP09543 421 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 NFKBIAP25963 317 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CDK9P50750 372 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 TRAP1Q12931 704 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 TRIM32Q13049 653 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 FAM45BPQ6NSW5 357 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 LINGO4Q6UY18 593 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 SYVN1Q86TM6 617 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 ADGRG5Q8IZF4 528 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PAF1Q8N7H5 531 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 FAM45AQ8TCE6 357 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 IRGQQ8WZA9 623 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 THAP11Q96EK4 314 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PARK7Q99497 189 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 MTG1Q9BT17 334 aaPredicted RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 HGH1Q9BTY7 390 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 ANKRD60Q9BZ19 345 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 ABCG8Q9H221 673 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 MFSD1Q9H3U5 465 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 GPBP1L1Q9HC44 474 aaPredicted RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 TRMT13Q9NUP7 481 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 PLK2Q9NYY3 685 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 UTS2RQ9UKP6 389 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PLXNB2O15031 1838 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 XIRP2A4UGR9 3374 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CCDC154A6NI56 674 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 GPR182O15218 404 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 NOBOXO60393 691 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 NDUFS3O75489 264 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 VARSP26640 1264 aaKnown RBP9.07□□□□□ -0.96
MSH4-201ENST00000263187 CCR3P51677 355 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 PCBP1Q15365 356 aaKnown RBP eCLIP9.07□□□□□ -0.96
MSH4-201ENST00000263187 FAM110CQ1W6H9 321 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 OGFOD2Q6N063 350 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 MRNIPQ6NTE8 343 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 KCTD8Q6ZWB6 473 aa9.07□□□□□ -0.96
MSH4-201ENST00000263187 TAS2R42Q7RTR8 314 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms