RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 OR10A6Q8NH74 314 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CSPG4P5Q96PW8 444 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 DKK3Q9UBP4 350 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CD84Q9UIB8 345 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 POMPQ9Y244 141 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 WNT10BO00744 389 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 ITM2AO43736 263 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TRBC1P01850 177 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 PSEN2P49810 448 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 ZACNQ401N2 412 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PGAM4Q8N0Y7 254 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AADATQ8N5Z0 425 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CD101Q93033 1021 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 LENG9Q96B70 501 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 IGFLR1Q9H665 355 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SGK2Q9HBY8 427 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AMBNQ9NP70 447 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PLK2Q9NYY3 685 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 STOML2Q9UJZ1 356 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 RICTORQ6R327 1708 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AIREO43918 545 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CLPXO76031 633 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AP2S1P53680 142 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 SUZ12Q15022 739 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 UBE2R2Q712K3 238 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 P2RY8Q86VZ1 359 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 COLGALT2Q8IYK4 626 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 FCRL2Q96LA5 508 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 HOPXQ9BPY8 73 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 LPIN3Q9BQK8 851 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 AJAP1Q9UKB5 411 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 DNAJA2O60884 412 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PAGE1O75459 146 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 RTN3O95197 1032 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 S100A6P06703 90 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TSHRP16473 764 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 ITGB5P18084 799 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 RPS12P25398 132 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 CDKN2BP42772 138 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 MANFP55145 182 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 PSMD5Q16401 504 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SH3PXD2AQ5TCZ1 1133 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 GALNTL5Q7Z4T8 443 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PEG10Q86TG7 708 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 CIR1Q86X95 450 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 CLUHO75153 1309 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 J3QRK9 145 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SCGNO76038 276 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 FABP3P05413 133 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 MYCLP1P12525 358 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 SNAPC1Q16533 368 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 COLEC12Q5KU26 742 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TRMT10BQ6PF06 316 aaKnown RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
SMG6-201ENST00000263073 BSNDQ8WZ55 320 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 FBXL8Q96CD0 374 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 PPCDCQ96CD2 204 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 TBC1D17Q9HA65 648 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 SNX7Q9UNH6 387 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
SMG6-201ENST00000263073 NT5C1B-RDH14C9J2C7 533 aa12□□□□□ -0.49
SMG6-201ENST00000263073 H3BSA7 217 aa12□□□□□ -0.49
SMG6-201ENST00000263073 UGT2B17O75795 530 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PGK1P00558 417 aa12□□□□□ -0.49
SMG6-201ENST00000263073 MATKP42679 507 aa12□□□□□ -0.49
SMG6-201ENST00000263073 TYSND1Q2T9J0 566 aa12□□□□□ -0.49
SMG6-201ENST00000263073 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PIGWQ7Z7B1 504 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PLD5Q8N7P1 536 aa12□□□□□ -0.49
SMG6-201ENST00000263073 ZCCHC2Q9C0B9 1178 aaKnown RBP12□□□□□ -0.49
SMG6-201ENST00000263073 RHOJQ9H4E5 214 aa12□□□□□ -0.49
SMG6-201ENST00000263073 GRHL1Q9NZI5 618 aa12□□□□□ -0.49
SMG6-201ENST00000263073 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PPM1HQ9ULR3 514 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PRAMEF33A0A0G2JMD5 474 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PSMD9O00233 223 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PIP5K1BO14986 540 aa12□□□□□ -0.49
SMG6-201ENST00000263073 PRAMEF10O60809 474 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms