RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 CYP2A7P20853 494 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SPAM1P38567 509 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 SQLEQ14534 574 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 DAB2IPQ5VWQ8 1189 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 BEND7Q8N7W2 519 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPN3-201ENST00000262539 FIBINQ8TAL6 211 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 RAB7BQ96AH8 199 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 RHBGQ9H310 441 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 WDR41Q9HAD4 459 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 V9GYQ6 96 aa8.2□□□□□ -1.1
PTPN3-201ENST00000262539 MSI1O43347 362 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SUPT7LO94864 414 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 OTCP00480 354 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 ANXA5P08758 320 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CDH2P19022 906 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SERPINB1P30740 379 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 BMPR1AP36894 532 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 NSG1P42857 185 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 NAGLUP54802 743 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 TAS2R39P59534 338 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 USP46P62068 366 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MTX3Q5HYI7 312 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 ADGRG6Q86SQ4 1221 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CDKN2AIPNLQ96HQ2 116 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SLC29A3Q9BZD2 475 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 KRT84Q9NSB2 600 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 ABCB8Q9NUT2 735 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 RUVBL2Q9Y230 463 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 EVPLLA8MZ36 301 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 TLL1O43897 1013 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 BEST1O76090 585 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 OR4Q2P0C623 313 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 TMEM126BQ8IUX1 230 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SCAIQ8N9R8 606 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CHRAC1Q9NRG0 131 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 LILRB3O75022 631 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 PIGNO95427 931 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CPSF4O95639 269 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 HLA-DQB2P05538 268 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MAGEA12P43365 314 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 EPS8Q12929 822 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CELF5Q8N6W0 485 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 GLB1L3Q8NCI6 653 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 APOL2Q9BQE5 337 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 RERGLQ9H628 205 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 DEC1Q9P2X7 70 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 EIF3LQ9Y262 564 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 KCNJ13O60928 360 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 STC2O76061 302 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 PPIBP23284 216 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SLC10A2Q12908 348 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 FASTKD3Q14CZ7 662 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 OTUD1Q5VV17 481 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 RINLQ6ZS11 566 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 TPRG1Q6ZUI0 275 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SUSD6Q92537 303 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 USP7Q93009 1102 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 WBP1LQ9NX94 342 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SMPD4Q9NXE4 827 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MPP6Q9NZW5 540 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 AP1M2Q9Y6Q5 423 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 A0A1W2PPM1 405 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SLC16A5O15375 505 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 JAK1P23458 1154 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 HSD17B2P37059 387 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 RXRGP48443 463 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 KCNK10P57789 538 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 BNIP2Q12982 314 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 ADRM1Q16186 407 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 PTPRNQ16849 979 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SNAP47Q5SQN1 464 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 RARS2Q5T160 578 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CACHD1Q5VU97 1274 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 SNX20Q7Z614 316 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 HEPHQ9BQS7 1158 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 NLE1Q9NVX2 485 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 MARCH5Q9NX47 278 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 CFAP97Q9P2B7 532 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 WBP11Q9Y2W2 641 aaKnown RBP8.19□□□□□ -1.1
PTPN3-201ENST00000262539 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
PTPN3-201ENST00000262539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 GNG14A0A1W2PPG7 69 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 GABBR2O75899 941 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 MAP3K6O95382 1288 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 TFEBP19484 476 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 CXCR2P25025 360 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 SLC10A7Q0GE19 358 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 KCNC3Q14003 757 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 GPRIN1Q7Z2K8 1008 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 ARRDC2Q8TBH0 407 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
PTPN3-201ENST00000262539 PDLIM5Q96HC4 596 aaKnown RBP8.18□□□□□ -1.1
PTPN3-201ENST00000262539 DERL2Q9GZP9 239 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms