RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 RNF112Q9ULX5 631 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 GPR182O15218 404 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 FGF10O15520 208 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 PRDX3P30048 256 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 POLD2P49005 469 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 ANKDD1AQ495B1 522 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 SLC39A12Q504Y0 691 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 ZNF280BQ86YH2 543 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 PDZD8Q8NEN9 1154 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 LRRC58Q96CX6 371 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 RPRD1AQ96P16 312 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 CXorf21Q9HAI6 301 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 GID8Q9NWU2 228 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 EVLQ9UI08 416 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 CNOT11Q9UKZ1 510 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 CCDC162PA2VCL2 907 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 MOXD2PA6NHM9 499 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 ARPC2O15144 300 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 CD3EAPO15446 510 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 B4GAT1O43505 415 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 LBPP18428 481 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 AGTR2P50052 363 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 PPP1R8Q12972 351 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 PCBP1Q15365 356 aaKnown RBP eCLIP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 KDELC1Q6UW63 502 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 RMDN1Q96DB5 314 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 TEX37Q96LM6 180 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 KCTD14Q9BQ13 255 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 SPON2Q9BUD6 331 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 NAA50Q9GZZ1 169 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 SAGE1Q9NXZ1 904 aa14.41□□□□□ -0.1
SFSWAP-201ENST00000261674 A0A0U1RQS6 177 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 A0A1W2PPW3 197 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 CACNG3O60359 315 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 SOAT2O75908 522 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 SLC6A2P23975 617 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 MLLT6P55198 1093 aaPredicted RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 KCNK10P57789 538 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 RBBP7Q16576 425 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 PIK3R6Q5UE93 754 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 FAM45BPQ6NSW5 357 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TMEM214Q6NUQ4 689 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 PAQR3Q6TCH7 311 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 LRRC8DQ7L1W4 858 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 SCD5Q86SK9 330 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 EPHX4Q8IUS5 362 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 FAM45AQ8TCE6 357 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 ISOC1Q96CN7 298 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TRIM15Q9C019 465 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 CCM2LQ9NUG4 571 aaPredicted RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TMEM39AQ9NV64 488 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 B4GALT3O60512 393 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 SNAP29O95721 258 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 NR4A1P22736 598 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 ITGB8P26012 769 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 PSMD7P51665 324 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 ZNF135P52742 658 aaPredicted RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TSNQ15631 228 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TMEM26Q6ZUK4 368 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 OTOP2Q7RTS6 562 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 THEM5Q8N1Q8 247 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 CFAP52Q8N1V2 620 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 FBXO39Q8N4B4 442 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 DHRSXQ8N5I4 330 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 CDK15Q96Q40 435 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 CFHR5Q9BXR6 569 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 ANKRD60Q9BZ19 345 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 ADNPQ9H2P0 1102 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 TUBB1Q9H4B7 451 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 NOL6Q9H6R4 1146 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 OSER1Q9NX31 292 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 POLG2Q9UHN1 485 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 DOLKQ9UPQ8 538 aa14.4□□□□□ -0.1
SFSWAP-201ENST00000261674 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 CA8P35219 290 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 OR1G1P47890 313 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 LIPEQ05469 1076 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 UPP1Q16831 310 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF549Q6P9A3 640 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 PAK6Q9NQU5 681 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 NEU3Q9UQ49 428 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ZFC3H1O60293 1989 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 GNRH1P01148 92 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ACVRL1P37023 503 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 GSK3BP49841 420 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 UFM1P61960 85 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 PMS2P3Q13401 168 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ZNF235Q14590 738 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 PAGE3Q5JUK9 113 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 BRMS1LQ5PSV4 323 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 TOP1MTQ969P6 601 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 PPM1MQ96MI6 270 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 MAGED1Q9Y5V3 778 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 NUP214P35658 2090 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 CDC7O00311 574 aa14.39□□□□□ -0.11
SFSWAP-201ENST00000261674 BMP2P12643 396 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms