RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TCRBV7S2A1N4TA0A589 114 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ENPP3O14638 875 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 NRP2O60462 931 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 SIN3BO75182 1162 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 CST3P01034 146 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ITGA3P26006 1051 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF155Q12901 538 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 NOMO1Q15155 1222 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 VWA5B1Q5TIE3 1220 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 CAPN13Q6MZZ7 669 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 TLE6Q9H808 572 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 PHF11Q9UIL8 331 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 GPC6Q9Y625 555 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 SMIM35A0A1B0GVV1 85 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ASGR1P07306 291 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 BPGMP07738 259 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ICAM3P32942 547 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 MTHFRP42898 656 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 RGS21Q2M5E4 152 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 CXXC5Q7LFL8 322 aaKnown RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 C17orf64Q86WR6 236 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 DAW1Q8N136 415 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 TRNT1Q96Q11 434 aaKnown RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 EBPLQ9BY08 206 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 PDZD7Q9H5P4 517 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 NMUR1Q9HB89 426 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ALOX15BO15296 676 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 GCATO75600 419 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 TACR2P21452 398 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 TUSC3Q13454 348 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 EXOSC8Q96B26 276 aaKnown RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 BTN2A3PQ96KV6 586 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 GPR21Q99679 349 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ATG10Q9H0Y0 220 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 RASSF1Q9NS23 344 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 IFT172Q9UG01 1749 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 SNAP91O60641 907 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 EPHX1P07099 455 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF460Q14592 562 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 KCNA10Q16322 511 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 TTC27Q6P3X3 843 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 JAZF1Q86VZ6 243 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 SLC34A3Q8N130 599 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 HMCESQ96FZ2 354 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 PTPN18Q99952 460 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF214Q9UL59 606 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-201ENST00000261037 UBE2QL1A1L167 161 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 WWP2O00308 870 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 BTN3A3O00478 584 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 ATG13O75143 517 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 MATN4O95460 622 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 C9P02748 559 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 POLR2JP52435 117 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 MBTD1Q05BQ5 628 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SUZ12Q15022 739 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 LRRC73Q5JTD7 316 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CADM2Q8N3J6 435 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 ADCY4Q8NFM4 1077 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 OR14C36Q8NHC7 312 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 TWIST2Q8WVJ9 160 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SLC9A6Q92581 669 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PPM1MQ96MI6 270 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 FAM192AQ9GZU8 254 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 REXO2Q9Y3B8 237 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 NUDT17P0C025 328 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 BMT2Q1RMZ1 405 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CXorf57Q6NSI4 855 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 TRABD2AQ86V40 505 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SPATA22Q8NHS9 363 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PDP1Q9P0J1 537 aaPredicted RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 DERAQ9Y315 318 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 TSPAN1O60635 241 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CILPO75339 1184 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CLUP10909 449 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 NT5EP21589 574 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PPM1AP35813 382 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 GBE1Q04446 702 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 FASTKD3Q14CZ7 662 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 AHI1Q8N157 1196 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SIDT2Q8NBJ9 832 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 OR2T12Q8NG77 320 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CLP1Q92989 425 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 RTKNQ9BST9 563 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 C3orf14Q9HBI5 128 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CACNG4Q9UBN1 327 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 RNF225M0QZC1 329 aaPredicted RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PLEKHG4Q58EX7 1191 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 OLFML2AQ68BL7 652 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 POTEHQ6S545 545 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF730Q6ZMV8 503 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms