RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CSRP1P21291 193 aaKnown RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 GPR1P46091 355 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 KIAA1024LP59773 190 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 HNRNPKP61978 463 aaKnown RBP eCLIP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 OLIG2Q13516 323 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 SPARCL1Q14515 664 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 UAP1Q16222 522 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ENPP7Q6UWV6 458 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 GSTA5Q7RTV2 222 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 PRUNE1Q86TP1 453 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 GLIS1Q8NBF1 620 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ATL2Q8NHH9 583 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 BLOC1S5Q8TDH9 187 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 UBLCP1Q8WVY7 318 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 TBL1YQ9BQ87 522 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 RIOK2Q9BVS4 552 aaKnown RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 LGR4Q9BXB1 951 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 TEX101Q9BY14 249 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 CENPHQ9H3R5 247 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 SLC32A1Q9H598 525 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 KLF15Q9UIH9 416 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 SDC3O75056 442 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 USP12O75317 370 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 FAM107AO95990 144 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 SLC4A1P02730 911 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 PYGLP06737 847 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 HMGCLP35914 325 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 FDFT1P37268 417 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ZNF844Q08AG5 666 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ICE2Q659A1 982 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 HEATR4Q86WZ0 1026 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 PDCD7Q8N8D1 485 aaKnown RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 DEFB124Q8NES8 71 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 RHBDD1Q8TEB9 315 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 MAGOHBQ96A72 148 aaKnown RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 WDR92Q96MX6 357 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 CCT8L2Q96SF2 557 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 RAB17Q9H0T7 212 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 LRRC40Q9H9A6 602 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ARNT2Q9HBZ2 717 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
SDCBP-201ENST00000260130 RAD18Q9NS91 495 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 PAK5Q9P286 719 aa16.68■□□□□ 0.26
SDCBP-201ENST00000260130 ASCC3Q8N3C0 2202 aaKnown RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 TMEM131Q92545 1883 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 H3BM21 787 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 AP2A1O95782 977 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 ZSCAN5DPP0CG00 497 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 JUNDP17535 347 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 KELP23276 732 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 HPDP32754 393 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 GRK6P43250 576 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 PPARDQ03181 441 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 DENND5AQ6IQ26 1287 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 KANSL1Q7Z3B3 1105 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 BTN2A2Q8WVV5 523 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 AGAP2Q99490 1192 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 CDH19Q9H159 772 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 PNMA8BQ9ULN7 279 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 GOLGA6L10A0A0M3HER8 536 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 TTI1O43156 1089 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 PIAS2O75928 621 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 SOD1P00441 154 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 MYCLP1P12525 358 aaPredicted RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 DGKAP23743 735 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 CDK3Q00526 305 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 CYP1B1Q16678 543 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 INAVAQ3KP66 663 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 HENMT1Q5T8I9 393 aaKnown RBP16.67■□□□□ 0.26
SDCBP-201ENST00000260130 ADAMTSL4Q6UY14 1074 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 C4orf22Q6V702 233 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 GLT6D1Q7Z4J2 308 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 SLC25A45Q8N413 288 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 TTC30BQ8N4P2 665 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 GPR26Q8NDV2 337 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 OR56A4Q8NGH8 313 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 RAB6BQ9NRW1 208 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 PCOLCE2Q9UKZ9 415 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
SDCBP-201ENST00000260130 ERI2A8K979 691 aaKnown RBP16.66■□□□□ 0.26
SDCBP-201ENST00000260130 E7EVH7 732 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 KCNK5O95279 499 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 CEACAM1P13688 526 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 BLKP51451 505 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 DCDC1P59894 354 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 DGLUCYQ7Z3D6 616 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 PHACTR4Q8IZ21 702 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 TSACCQ96A04 125 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-201ENST00000260130 BPIFA1Q9NP55 256 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 UCKL1Q9NWZ5 548 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 NFKBIL1Q9UBC1 381 aaPredicted RBP16.66■□□□□ 0.26
SDCBP-201ENST00000260130 KLQ9UEF7 1012 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 CABIN1Q9Y6J0 2220 aa16.66■□□□□ 0.26
SDCBP-201ENST00000260130 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
SDCBP-201ENST00000260130 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms