RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 RABGAP1Q9Y3P9 1069 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ATP6V0A2Q9Y487 856 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 PCDHGB1Q9Y5G3 927 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 ABCC4O15439 1325 aa4.97□□□□□ -1.61
TRA2B-201ENST00000259043 RTL9Q8NET4 1388 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 K7ENM7 598 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 PSMD14O00487 310 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 CHL1O00533 1208 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 KLK10O43240 276 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 KCNJ13O60928 360 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 TMEM63AO94886 807 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 RTN3O95197 1032 aaPredicted RBP4.96□□□□□ -1.62
TRA2B-201ENST00000259043 CLCN5P51795 746 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 ARSFP54793 590 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 GAS1P54826 345 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 GOLGA8FQ08AF8 430 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 TEFQ10587 303 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 KCTD2Q14681 263 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 LPIN1Q14693 890 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 CCDC30Q5VVM6 783 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 ZNF34Q8IZ26 560 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 RASSF8Q8NHQ8 419 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 NOC3LQ8WTT2 800 aaKnown RBP4.96□□□□□ -1.62
TRA2B-201ENST00000259043 TMEM170AQ8WVE7 144 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 SNRNP27Q8WVK2 155 aaKnown RBP4.96□□□□□ -1.62
TRA2B-201ENST00000259043 CDCA5Q96FF9 252 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 TIGD1Q96MW7 591 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 TREX2Q9BQ50 279 aaPredicted RBP4.96□□□□□ -1.62
TRA2B-201ENST00000259043 AGXT2Q9BYV1 514 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 PLEKHA5Q9HAU0 1116 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 GDAQ9Y2T3 454 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 CYP46A1Q9Y6A2 500 aa4.96□□□□□ -1.62
TRA2B-201ENST00000259043 LAMA3Q16787 3333 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-201ENST00000259043 DYTNA2CJ06 578 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 LINC01553A4QN01 128 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SMTNL1A8MU46 457 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 KDM4EB2RXH2 506 aaPredicted RBP4.95□□□□□ -1.62
TRA2B-201ENST00000259043 ERVV-1B6SEH8 477 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 J3KR12 359 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 TIMM23O14925 209 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 ZBED4O75132 1171 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 GPTP24298 496 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 CHMP24386 653 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 PAFAH1B1P43034 410 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 TUBA1BP68363 451 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 RPL36AP83881 106 aaKnown RBP4.95□□□□□ -1.62
TRA2B-201ENST00000259043 COASYQ13057 564 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 TNIP1Q15025 636 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 IZUMO4Q1ZYL8 232 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SLC9C2Q5TAH2 1124 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SPATA1Q5VX52 437 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 ITPRIPL1Q6GPH6 555 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 NEK10Q6ZWH5 1172 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 MON1AQ86VX9 555 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 GHDCQ8N2G8 530 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 TBC1D22AQ8WUA7 517 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 STAMQ92783 540 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SH3KBP1Q96B97 665 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 RTP4Q96DX8 246 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 RNF125Q96EQ8 232 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 DOCK7Q96N67 2140 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 NYXQ9GZU5 481 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 STN1Q9H668 368 aaKnown RBP4.95□□□□□ -1.62
TRA2B-201ENST00000259043 DDX31Q9H8H2 851 aaKnown RBP4.95□□□□□ -1.62
TRA2B-201ENST00000259043 OCIAD1Q9NX40 245 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 CNPY2Q9Y2B0 182 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SCN5AQ14524 2016 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 MAP3K15Q6ZN16 1313 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 SCN9AQ15858 1988 aa4.95□□□□□ -1.62
TRA2B-201ENST00000259043 A0A1B0GVM2 712 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 CBY3A6NI87 242 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 PEX12O00623 359 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 TSPAN4O14817 238 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 TIMM44O43615 452 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 CHRM4P08173 479 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 GPD2P43304 727 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 CXCR3P49682 368 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 COMPP49747 757 aaPredicted RBP4.94□□□□□ -1.62
TRA2B-201ENST00000259043 RPP30P78346 268 aaKnown RBP4.94□□□□□ -1.62
TRA2B-201ENST00000259043 ST3GAL1Q11201 340 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 CAPSQ13938 189 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 CAMK1Q14012 370 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 EFHC1Q5JVL4 640 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 SLC10A5Q5PT55 438 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 DENND6AQ8IWF6 608 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 TDRD7Q8NHU6 1098 aaKnown RBP4.94□□□□□ -1.62
TRA2B-201ENST00000259043 RAB40AQ8WXH6 277 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 HSPH1Q92598 858 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 NEUROD6Q96NK8 337 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 SLITRK1Q96PX8 696 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 C1QTNF4Q9BXJ3 329 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 GAREM1Q9H706 876 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 DBNDD1Q9H9R9 158 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 ENTPD7Q9NQZ7 604 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 TMEM51Q9NW97 253 aa4.94□□□□□ -1.62
TRA2B-201ENST00000259043 ORC3Q9UBD5 711 aaPredicted RBP4.94□□□□□ -1.62
TRA2B-201ENST00000259043 ZNF646O15015 1829 aaPredicted RBP4.93□□□□□ -1.62
TRA2B-201ENST00000259043 A0A0U1RQJ8 604 aa4.93□□□□□ -1.62
TRA2B-201ENST00000259043 A0A1W2PPH5 198 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms