RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 MS4A5Q9H3V2 200 aa7.31□□□□□ -1.24
MRPL47-201ENST00000259038 ERVMER34-1Q9H9K5 563 aa7.31□□□□□ -1.24
MRPL47-201ENST00000259038 POLR1BQ9H9Y6 1135 aa7.31□□□□□ -1.24
MRPL47-201ENST00000259038 SCN8AQ9UQD0 1980 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3DA0A087WVF3 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3IA0A087WXS9 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3EA0A087X179 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3KA0A087X1G2 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3FA6NER0 549 aaPredicted RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 LRRC72A6NJI9 287 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 YJEFN3A6XGL0 299 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3LB9A6J9 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 E7ENQ6 273 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 FFAR2O15552 330 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 PHF2O75151 1096 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 RTN2O75298 545 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 ATP5BP06576 529 aaKnown RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 CLEC2LP0C7M8 214 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3HP0C7X1 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 GOT1P17174 413 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 ENPP1P22413 925 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 DGKAP23743 735 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 CSKP41240 450 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 PIK3CAP42336 1068 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TKTL1P51854 596 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 UCNP55089 124 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 ERVPABLB-1P60509 514 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SNRPFP62306 86 aaKnown RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 RPS24P62847 133 aaKnown RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 E2F1Q01094 437 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 PPP3CAQ08209 521 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SRSF6Q13247 344 aaKnown RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SLC39A14Q15043 492 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 E2F5Q15329 346 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 KNOP1Q1ED39 458 aaKnown RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 C3orf38Q5JPI3 329 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 PITRM1Q5JRX3 1037 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3GQ6DHY5 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3CQ6IPX1 549 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 NAPEPLDQ6IQ20 393 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 DOK3Q7L591 496 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 LYSMD2Q8IV50 215 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TBC1D3Q8IZP1 549 aaPredicted RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 APCDD1Q8J025 514 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SLC4A11Q8NBS3 891 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 CLRN3Q8NCR9 226 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 OR4C6Q8NH72 309 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TAS1R2Q8TE23 839 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SKA1Q96BD8 255 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 DHX58Q96C10 678 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 MYOCQ99972 504 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 C7orf25Q9BPX7 421 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 CPPED1Q9BRF8 314 aaPredicted RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SCAND2PQ9GZW5 306 aaPredicted RBP7.3□□□□□ -1.24
MRPL47-201ENST00000259038 TNMDQ9H2S6 317 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 KCTD10Q9H3F6 313 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SARDHQ9UL12 918 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 FZD4Q9ULV1 537 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SCML1Q9UN30 329 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 SATB2Q9UPW6 733 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 ERVW-1Q9UQF0 538 aa7.3□□□□□ -1.24
MRPL47-201ENST00000259038 UBE4BO95155 1302 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 RNF103O00237 685 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 PRAMEF4O60810 478 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 DNAJC6O75061 913 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 ZBED1O96006 694 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 IGLV3-27P01718 113 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 RPN1P04843 607 aaKnown RBP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CENPBP07199 599 aaPredicted RBP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 ADH4P08319 380 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 TRIM49P0CI25 452 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 TRIM49CP0CI26 452 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CKMT1AP12532 417 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 P4HA1P13674 534 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 ITGB6P18564 788 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 TGM2P21980 687 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 PTGS2P35354 604 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CASRP41180 1078 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 GCLMP48507 274 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 HARS2P49590 506 aaKnown RBP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 STK19P49842 368 aaPredicted RBP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 AP3M2P53677 418 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 RAD23BP54727 409 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 LGALS4P56470 323 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CUL4BQ13620 913 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 ZNF542PQ5EBM4 170 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CT83Q5H943 113 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 BSPRYQ5W0U4 402 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.29□□□□□ -1.24
MRPL47-201ENST00000259038 UNC13DQ70J99 1090 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 MFN1Q8IWA4 741 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 GRAMD1CQ8IYS0 662 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 CFAP52Q8N1V2 620 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 AFAP1L2Q8N4X5 818 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 UBR7Q8N806 425 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 KIAA0895Q8NCT3 520 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 FIBINQ8TAL6 211 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 SNX33Q8WV41 574 aa7.29□□□□□ -1.24
MRPL47-201ENST00000259038 TAF4BQ92750 862 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms