RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 POLD2P49005 469 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 SIM2Q14190 667 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-201ENST00000258962 USP10Q14694 798 aaKnown RBP17.39■□□□□ 0.37
SRSF1-201ENST00000258962 ZKSCAN8Q15776 578 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-201ENST00000258962 TYSND1Q2T9J0 566 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 PRR23BQ6ZRT6 265 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 CPLX4Q7Z7G2 160 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 CEP97Q8IW35 865 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 ARMC2Q8NEN0 867 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 CABS1Q96KC9 395 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 MTG2Q9H4K7 406 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 BPIFA1Q9NP55 256 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF358Q9NW07 568 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 DCDC2Q9UHG0 476 aa17.39■□□□□ 0.37
SRSF1-201ENST00000258962 H7C0S8 307 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 STX7O15400 261 aaKnown RBP17.38■□□□□ 0.37
SRSF1-201ENST00000258962 PHGDHO43175 533 aaKnown RBP17.38■□□□□ 0.37
SRSF1-201ENST00000258962 UGT2B4P06133 528 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 SLC35E2BP0CK96 405 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 SAT1P21673 171 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 HNF1BP35680 557 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 HMGCLP35914 325 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 ENPP2Q13822 863 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 INSCQ1MX18 579 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 N4BP2L1Q5TBK1 243 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-201ENST00000258962 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 FOXR1Q6PIV2 292 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
SRSF1-201ENST00000258962 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 GAB3Q8WWW8 586 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 ERLEC1Q96DZ1 483 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 ELMO2Q96JJ3 720 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF641Q96N77 438 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-201ENST00000258962 NDNQ99608 321 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 OMDQ99983 421 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 TPSD1Q9BZJ3 242 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 GPR63Q9BZJ6 419 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 TMEM216Q9P0N5 145 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 PPIL1Q9Y3C6 166 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 WASF2Q9Y6W5 498 aa17.38■□□□□ 0.37
SRSF1-201ENST00000258962 NPIPB15A6NHN6 443 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 PLIN3O60664 434 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 PROCP04070 461 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 GSTA1P08263 222 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 NNMTP40261 264 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 STC1P52823 247 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 TAS2R39P59534 338 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 XIAPP98170 497 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 RAD51Q06609 339 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 SRSF5Q13243 272 aaKnown RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 PEX6Q13608 980 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF460Q14592 562 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 KIAA1211LQ6NV74 962 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 GDPD4Q6W3E5 623 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ALYREFQ86V81 257 aaKnown RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 PAF1Q8N7H5 531 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 GRIN3AQ8TCU5 1115 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 LRRC8CQ8TDW0 803 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF75CPQ92670 426 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 LYSMD1Q96S90 227 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 OLFM1Q99784 485 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 HEPHQ9BQS7 1158 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 MECRQ9BV79 373 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 SUN2Q9UH99 717 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 C1orf232A0A0U1RR37 186 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 GFRA3O60609 400 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 GABRG2P18507 467 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 MC4RP32245 332 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 RECQLP46063 649 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 CDKN1CP49918 316 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 RAB10P61026 200 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 POU4F1Q01851 419 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF549Q6P9A3 640 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 RAPH1Q70E73 1250 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 TSPAN33Q86UF1 283 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZNF366Q8N895 744 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 KLHL32Q96NJ5 620 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 MCCC1Q96RQ3 725 aaPredicted RBP17.37■□□□□ 0.37
SRSF1-201ENST00000258962 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZFYVE1Q9HBF4 777 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ANKRD6Q9Y2G4 727 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 PKP3Q9Y446 797 aa17.37■□□□□ 0.37
SRSF1-201ENST00000258962 ZFHX2Q9C0A1 2572 aaPredicted RBP17.36■□□□□ 0.37
SRSF1-201ENST00000258962 PLXNB3Q9ULL4 1909 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 PRR23AA6NEV1 266 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
SRSF1-201ENST00000258962 CLDN7O95471 211 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 CTSLP07711 333 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 BPGMP07738 259 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 HLA-EP13747 358 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 STMN1P16949 149 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 BGNP21810 368 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 IRX4P78413 519 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 TAF1BQ53T94 588 aaPredicted RBP17.36■□□□□ 0.37
SRSF1-201ENST00000258962 HECTD2Q5U5R9 776 aa17.36■□□□□ 0.37
SRSF1-201ENST00000258962 CGB2Q6NT52 195 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms