RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 OR10H1Q9Y4A9 318 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TRPV2Q9Y5S1 764 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ASGR1P07306 291 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ATF6P18850 670 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 GTF2BQ00403 316 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SWI5Q1ZZU3 235 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 LLGL2Q6P1M3 1020 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 AMIGO2Q86SJ2 522 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SLITRK4Q8IW52 837 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SNIP1Q8TAD8 396 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 DIRAS2Q96HU8 199 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ACO2Q99798 780 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MECRQ9BV79 373 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 DUSP16Q9BY84 665 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 TAS2R7Q9NYW3 318 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MAP1BP46821 2468 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 FAM240BA0A1B0GVZ2 78 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 XKRYO14609 159 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PDCD5O14737 125 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 GRIN3BO60391 1043 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ATG13O75143 517 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 IFNA7P01567 189 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 NR4A1P22736 598 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CDH5P33151 784 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SLC25A52Q3SY17 297 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PARP15Q460N3 678 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 EIPR1Q53HC9 387 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 RANBP3LQ86VV4 465 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 RASAL3Q86YV0 1011 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 C12orf50Q8NA57 414 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ACER1Q8TDN7 264 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 EXD2Q9NVH0 621 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 NUDT4Q9NZJ9 180 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PLXNA1Q9UIW2 1896 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 UBE2Q2LH0YL09 131 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PLOD2O00469 737 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SLC22A1O15245 554 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 LRATO95237 230 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 KLRC2P26717 231 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PFKPQ01813 784 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 IRF8Q02556 426 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ADGRE1Q14246 886 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CXorf57Q6NSI4 855 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ULK3Q6PHR2 472 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PRR23CQ6ZRP0 262 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 APTXQ7Z2E3 356 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PIGXQ8TBF5 258 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 DNAJA4Q8WW22 397 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF347Q96SE7 839 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ALG2Q9H553 416 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ASB8Q9H765 288 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ANKHQ9HCJ1 492 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 LRRC4CQ9HCJ2 640 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 EIF2B3Q9NR50 452 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ZNHIT2Q9UHR6 403 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MEMO1Q9Y316 297 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MATN2O00339 956 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 KRT33AO76009 404 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 GOT1P17174 413 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CHKAP35790 457 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MARSP56192 900 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MRPS6P82932 125 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 HERC3Q15034 1050 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 QSOX2Q6ZRP7 698 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CCDC107Q8WV48 283 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 DNAJB3Q8WWF6 145 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 RIT1Q92963 219 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CRELD1Q96HD1 420 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 PNMA5Q96PV4 448 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CITED4Q96RK1 184 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 FTHL17Q9BXU8 183 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 IL1RAPQ9NPH3 570 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 MED11Q9P086 117 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 BTAF1O14981 1849 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 KCNQ2O43526 872 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 EDF1O60869 148 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 APOC1P02654 83 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ITPK1Q13572 414 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 C15orf59Q2T9L4 293 aaPredicted RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 BRMS1LQ5PSV4 323 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 RBM48Q5RL73 367 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CCNYL2Q5T2Q4 361 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF697Q5TEC3 545 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 FKBP1CQ5VVH2 108 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ADNP2Q6IQ32 1131 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CHSY3Q70JA7 882 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 GALNT5Q7Z7M9 940 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 P2RY8Q86VZ1 359 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 TSEN15Q8WW01 171 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 UFD1Q92890 307 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 COL26A1Q96A83 441 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
RC3H1-201ENST00000258349 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 ADARB2Q9NS39 739 aaKnown RBP4.78□□□□□ -1.64
RC3H1-201ENST00000258349 SEC14L3Q9UDX4 400 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms