RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 TRMOQ9BU70 441 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 MID1IP1Q9NPA3 183 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 DLGAP2Q9P1A6 1054 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 FCF1Q9Y324 198 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 SUPT3HB4E1H0 165 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 TBL1XO60907 577 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 SUPT3HO75486 399 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 GPC4O75487 556 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 CXCL14O95715 111 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 ALDOCP09972 364 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 MC4RP32245 332 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 AQP4P55087 323 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 NME5P56597 212 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 PTPRNQ16849 979 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 GEN1Q17RS7 908 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 LARP4Q71RC2 724 aaKnown RBP eCLIP18.61■□□□□ 0.574e-6■□□□□ 9
PDLIM4-201ENST00000253754 DNAJB7Q7Z6W7 309 aaPredicted RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 PDSS2Q86YH6 399 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 BHLHE22Q8NFJ8 381 aaPredicted RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 WFDC5Q8TCV5 224 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 TRPC4APQ8TEL6 797 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 HERVK_113Q902F9 699 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 ZFRQ96KR1 1074 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 BIRC8Q96P09 236 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 MRPL1Q9BYD6 325 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 POPDC3Q9HBV1 291 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 INSL5Q9Y5Q6 135 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 NPEPPSL1A6NEC2 478 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 NCF1BA6NI72 391 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 NCF1CA8MVU1 366 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 ANKRD66B4E2M5 251 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 NIPSNAP2O75323 286 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PRAMEF12O95522 483 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 MBL2P11226 248 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 NCF1P14598 390 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 SMAD3P84022 425 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PTK2BQ14289 1009 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 ATXN7L2Q5T6C5 722 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 REP15Q6BDI9 236 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 CAPRIN2Q6IMN6 1127 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PAOXQ6QHF9 649 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 SIDT2Q8NBJ9 832 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 TFB2MQ9H5Q4 396 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 TAS2R13Q9NYV9 303 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 ADA2Q9NZK5 511 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 VPS28Q9UK41 221 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 RNF112Q9ULX5 631 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 ARIH1Q9Y4X5 557 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PCDHGA7Q9Y5G6 932 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PDE4DIPQ5VU43 2346 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 H0Y626 953 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 TGM5O43548 720 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PENKP01210 267 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 LINGO3P0C6S8 592 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 LPOP22079 712 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 PAX7P23759 505 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 EEF1DP29692 281 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 RHEBL1Q8TAI7 183 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 SPDL1Q96EA4 605 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 DDX50Q9BQ39 737 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 CCDC68Q9H2F9 335 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 AKTIPQ9H8T0 292 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 CACNA2D2Q9NY47 1150 aa18.6■□□□□ 0.57
PDLIM4-201ENST00000253754 E7ENX8 843 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 K7ERQ8 282 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 PIP5K1BO14986 540 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 CLASP2O75122 1294 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 ECI2O75521 394 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 HOXB8P17481 243 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 ME2P23368 584 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 CTNNB1P35222 781 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 EPHB3P54753 998 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 PSME3P61289 254 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 MMEL1Q495T6 779 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 ZRANB3Q5FWF4 1079 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 LAYNQ6UX15 382 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 OR6K2Q8NGY2 324 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 GATA6Q92908 595 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 KIAA1191Q96A73 305 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 KLHL4Q9C0H6 718 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 ZNF334Q9HCZ1 680 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 SEMA4BQ9NPR2 832 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 LHX3Q9UBR4 397 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 BTRCQ9Y297 605 aa18.59■□□□□ 0.57
PDLIM4-201ENST00000253754 KERAO60938 352 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 CREMQ03060 361 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 RALGDSQ12967 914 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 CTSL3PQ5NE16 218 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 TXNDC8Q6A555 127 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 RAB44Q7Z6P3 723 aaPredicted RBP18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 GPR65Q8IYL9 337 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 CLYBLQ8N0X4 340 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 TWIST2Q8WVJ9 160 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 SLC45A3Q96JT2 553 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 TCF25Q9BQ70 676 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 DERL2Q9GZP9 239 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 TUBB1Q9H4B7 451 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 RETREG1Q9H6L5 497 aa18.58■□□□□ 0.57
PDLIM4-201ENST00000253754 UNC80Q8N2C7 3258 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms