RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PACSIN1Q9BY11 444 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 ADGRE3Q9BY15 652 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 XPO4Q9C0E2 1151 aaKnown RBP20.9■□□□□ 0.94
NEDD8-201ENST00000250495 RMI1Q9H9A7 625 aa20.9■□□□□ 0.94
NEDD8-201ENST00000250495 ZNHIT6Q9NWK9 470 aaKnown RBP20.9■□□□□ 0.94
NEDD8-201ENST00000250495 TRBV23OR9-2A0A075B6M9 112 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 J3QKU1 62 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 DNAJC6O75061 913 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 ITGB2P05107 769 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 TMEM253P0C7T8 217 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 FGF3P11487 239 aaPredicted RBP20.89■□□□□ 0.93
NEDD8-201ENST00000250495 CD86P42081 329 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 PPIDQ08752 370 aaKnown RBP20.89■□□□□ 0.93
NEDD8-201ENST00000250495 MESDQ14696 234 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 QPCTQ16769 361 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 SFRP1Q8N474 314 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 RAPGEF5Q92565 580 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 MAK16Q9BXY0 300 aaKnown RBP20.89■□□□□ 0.93
NEDD8-201ENST00000250495 CNOT6Q9ULM6 557 aaKnown RBP20.89■□□□□ 0.93
NEDD8-201ENST00000250495 PCDHGA3Q9Y5H0 932 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 CFAP46Q8IYW2 2715 aa20.89■□□□□ 0.93
NEDD8-201ENST00000250495 SSU72P8A0A1W2PR75 194 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 ZNF487B1APH4 448 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 STMND1H3BQB6 276 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 KCNK1O00180 336 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 AKR1B10O60218 316 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 ATP1A1P05023 1023 aaKnown RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 MMP2P08253 660 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 PPM1FP49593 454 aaPredicted RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 IFI35P80217 286 aaPredicted RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 SRSF6Q13247 344 aaKnown RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 ASTE1Q2TB18 679 aaPredicted RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 HENMT1Q5T8I9 393 aaKnown RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 CHST15Q7LFX5 561 aaPredicted RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 VSIG1Q86XK7 387 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 OR10G6Q8NH81 332 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 SLC37A2Q8TED4 501 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 SH3KBP1Q96B97 665 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 WDR24Q96S15 920 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 ARHGAP9Q9BRR9 750 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 ZMYND15Q9H091 742 aa20.88■□□□□ 0.93
NEDD8-201ENST00000250495 STN1Q9H668 368 aaKnown RBP20.88■□□□□ 0.93
NEDD8-201ENST00000250495 LRRD1A4D1F6 860 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 CBFA2T2O43439 604 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 THRAP10827 490 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 SLC2A4P14672 509 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 ARHGAP25P42331 645 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 ATP1A2P50993 1020 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 TRIM14Q14142 442 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.87■□□□□ 0.93
NEDD8-201ENST00000250495 VASH2Q86V25 355 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 CNTD1Q8N815 330 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 SLC35G2Q8TBE7 412 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 DNAJC7Q99615 494 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 ASPSCR1Q9BZE9 553 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 SARS2Q9NP81 518 aaKnown RBP20.87■□□□□ 0.93
NEDD8-201ENST00000250495 PDP2Q9P2J9 529 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 PCDHGA4Q9Y5G9 962 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 HEY1Q9Y5J3 304 aa20.87■□□□□ 0.93
NEDD8-201ENST00000250495 OAS3Q9Y6K5 1087 aaKnown RBP20.87■□□□□ 0.93
NEDD8-201ENST00000250495 DUX1O43812 170 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 ZIC2O95409 532 aaPredicted RBP20.86■□□□□ 0.93
NEDD8-201ENST00000250495 ZFXP17010 805 aaPredicted RBP20.86■□□□□ 0.93
NEDD8-201ENST00000250495 MPSTP25325 297 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 HHEXQ03014 270 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 AP1B1Q10567 949 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 PDK1Q15118 436 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 LINC00303Q3SY05 128 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 SLC9A4Q6AI14 798 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 IYDQ6PHW0 289 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 LYSMD3Q7Z3D4 306 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 PLD5Q8N7P1 536 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 DDA1Q9BW61 102 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 CARD9Q9H257 536 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 ZFYVE1Q9HBF4 777 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 SLC39A1Q9NY26 324 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 PRKAB1Q9Y478 270 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 PIEZO2Q9H5I5 2752 aa20.86■□□□□ 0.93
NEDD8-201ENST00000250495 OR5K4A6NMS3 321 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 FADS2P1A8MWK0 482 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 B4E171 279 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 APOL1O14791 398 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 NUAK1O60285 661 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 EML2O95834 649 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 TPM1P09493 284 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 CSF2RBP32927 897 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 TSPAN7P41732 249 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 ZBTB17Q13105 803 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 ODF2Q5BJF6 829 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 WDR74Q6RFH5 385 aaPredicted RBP20.85■□□□□ 0.93
NEDD8-201ENST00000250495 SLC9B2Q86UD5 537 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 NT5DC3Q86UY8 548 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 ZNF761Q86XN6 746 aaPredicted RBP20.85■□□□□ 0.93
NEDD8-201ENST00000250495 RHOT2Q8IXI1 618 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 EXD3Q8N9H8 876 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 EXTL1Q92935 676 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 ART4Q93070 314 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 HERPUD2Q9BSE4 406 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms