RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 OPA1O60313 960 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 TCEA3O75764 348 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 C1QTNF9P0C862 333 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 BPIP17213 487 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 SPAM1P38567 509 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 GDF10P55107 478 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
VPREB3-201ENST00000248948 PARP6Q2NL67 630 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 PYCR3Q53H96 274 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 CDCP2Q5VXM1 449 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 ALS2CLQ60I27 953 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 OGFOD3Q6PK18 319 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 RANBP10Q6VN20 620 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 TAF8Q7Z7C8 310 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 FAM71DQ8N9W8 422 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 GPR156Q8NFN8 814 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 MAPK15Q8TD08 544 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 BLOC1S5Q8TDH9 187 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 MAIP1Q8WWC4 291 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 GLYATL1Q969I3 302 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 NXPE2Q96DL1 559 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 DEPDC7Q96QD5 511 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 TMEM121Q9BTD3 319 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 SPATA16Q9BXB7 569 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 TLR10Q9BXR5 811 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 CNOT6Q9ULM6 557 aaKnown RBP12.67□□□□□ -0.38
VPREB3-201ENST00000248948 PADI4Q9UM07 663 aa12.67□□□□□ -0.38
VPREB3-201ENST00000248948 B4DGG1 531 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 AURKAO14965 403 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 NOBOXO60393 691 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 DNAJC6O75061 913 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 FUCA1P04066 466 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PNLIPP16233 465 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 ADCY8P40145 1251 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 POLD2P49005 469 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PDE1BQ01064 536 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 CAMK2BQ13554 666 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 TCEA2Q15560 299 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 CERCAMQ5T4B2 595 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 NRROSQ86YC3 692 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 KDF1Q8NAX2 398 aaPredicted RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 CCL4L1Q8NHW4 92 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 ATG4AQ8WYN0 398 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 TBL1YQ9BQ87 522 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 LRRC40Q9H9A6 602 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 ARNT2Q9HBZ2 717 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 IL17CQ9P0M4 197 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 PKP3Q9Y446 797 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 ANKRD11Q6UB99 2663 aaPredicted RBP12.66□□□□□ -0.38
VPREB3-201ENST00000248948 KNTC1P50748 2209 aa12.66□□□□□ -0.38
VPREB3-201ENST00000248948 GLYATL1P3A0A0U1RQE8 302 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 CPED1A4D0V7 1026 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 FAM149AA5PLN7 773 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ZSCAN12O43309 604 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 VEGFDO43915 354 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 NUAK1O60285 661 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ASMTLO95671 621 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 CRTAMO95727 393 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 AP2A1O95782 977 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 AGTP01019 485 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 MYF5P13349 255 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 JUPP14923 745 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 GLB1P16278 677 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 CTBSQ01459 385 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ITGA9Q13797 1035 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 HLTFQ14527 1009 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 TAF1AQ15573 450 aaPredicted RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 PERM1Q5SV97 790 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 DRICH1Q6PGQ1 229 aaPredicted RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 C17orf82Q86X59 251 aaPredicted RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 CCDC74AQ96AQ1 378 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 CCDC3Q9BQI4 270 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ZCCHC2Q9C0B9 1178 aaKnown RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ABCG4Q9H172 646 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 SUDS3Q9H7L9 328 aaPredicted RBP12.65□□□□□ -0.38
VPREB3-201ENST00000248948 TAAR2Q9P1P5 351 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 GULP1Q9UBP9 304 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 APPL1Q9UKG1 709 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
VPREB3-201ENST00000248948 ACACAQ13085 2346 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 C2orf81A6NN90 581 aa12.64□□□□□ -0.39
VPREB3-201ENST00000248948 CHUKO15111 745 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms